Protein–RNA interactions for Protein: O95238

SPDEF, SAM pointed domain-containing Ets transcription factor, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDEFO95238 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SPDEFO95238 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SPDEFO95238 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SPDEFO95238 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SPDEFO95238 AL137060.1-201ENST00000618151 2648 ntBASIC19.12■□□□□ 0.65
SPDEFO95238 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
SPDEFO95238 AC127496.7-201ENST00000625110 1798 ntBASIC19.12■□□□□ 0.65
SPDEFO95238 SHD-204ENST00000599689 1729 ntTSL 5 BASIC19.12■□□□□ 0.65
SPDEFO95238 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
SPDEFO95238 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SPDEFO95238 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SPDEFO95238 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SPDEFO95238 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SPDEFO95238 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
SPDEFO95238 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SPDEFO95238 RARRES2P2-201ENST00000394842 485 ntBASIC19.11■□□□□ 0.65
SPDEFO95238 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SPDEFO95238 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC19.11■□□□□ 0.65
SPDEFO95238 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
SPDEFO95238 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.11■□□□□ 0.65
SPDEFO95238 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SPDEFO95238 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
SPDEFO95238 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
SPDEFO95238 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SPDEFO95238 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC19.1■□□□□ 0.65
SPDEFO95238 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SPDEFO95238 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC19.1■□□□□ 0.65
SPDEFO95238 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SPDEFO95238 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
SPDEFO95238 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SPDEFO95238 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SPDEFO95238 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SPDEFO95238 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SPDEFO95238 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SPDEFO95238 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SPDEFO95238 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
SPDEFO95238 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SPDEFO95238 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
SPDEFO95238 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.09■□□□□ 0.65
SPDEFO95238 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
SPDEFO95238 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
SPDEFO95238 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
SPDEFO95238 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SPDEFO95238 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.09■□□□□ 0.65
SPDEFO95238 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC19.09■□□□□ 0.65
SPDEFO95238 AC009831.1-201ENST00000580420 1582 ntBASIC19.09■□□□□ 0.65
SPDEFO95238 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SPDEFO95238 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SPDEFO95238 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
SPDEFO95238 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
SPDEFO95238 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
SPDEFO95238 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC19.08■□□□□ 0.65
SPDEFO95238 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
SPDEFO95238 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC19.08■□□□□ 0.64
SPDEFO95238 AC133552.2-201ENST00000619106 1032 ntBASIC19.08■□□□□ 0.64
SPDEFO95238 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
SPDEFO95238 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC19.08■□□□□ 0.64
SPDEFO95238 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SPDEFO95238 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
SPDEFO95238 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SPDEFO95238 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SPDEFO95238 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
SPDEFO95238 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SPDEFO95238 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SPDEFO95238 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SPDEFO95238 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SPDEFO95238 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SPDEFO95238 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SPDEFO95238 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SPDEFO95238 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
SPDEFO95238 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
SPDEFO95238 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SPDEFO95238 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SPDEFO95238 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SPDEFO95238 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SPDEFO95238 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC19.07■□□□□ 0.64
SPDEFO95238 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC19.07■□□□□ 0.64
SPDEFO95238 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
SPDEFO95238 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SPDEFO95238 FOXO3B-201ENST00000395675 1928 ntBASIC19.07■□□□□ 0.64
SPDEFO95238 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SPDEFO95238 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC19.07■□□□□ 0.64
SPDEFO95238 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
SPDEFO95238 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC19.06■□□□□ 0.64
SPDEFO95238 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
SPDEFO95238 GUSBP5-202ENST00000510805 1989 ntBASIC19.06■□□□□ 0.64
SPDEFO95238 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SPDEFO95238 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SPDEFO95238 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SPDEFO95238 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SPDEFO95238 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
SPDEFO95238 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC19.05■□□□□ 0.64
SPDEFO95238 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SPDEFO95238 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC19.05■□□□□ 0.64
SPDEFO95238 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.05■□□□□ 0.64
SPDEFO95238 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
SPDEFO95238 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
SPDEFO95238 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC19.05■□□□□ 0.64
SPDEFO95238 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SPDEFO95238 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms