Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 AC008764.7-201ENST00000593779 1081 ntBASIC23.16■■□□□ 1.3
TBC1D3BA6NDS4 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
TBC1D3BA6NDS4 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TBC1D3BA6NDS4 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC23.16■■□□□ 1.3
TBC1D3BA6NDS4 ALDH1A3-203ENST00000557963 1670 ntBASIC23.16■■□□□ 1.3
TBC1D3BA6NDS4 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
TBC1D3BA6NDS4 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC23.15■■□□□ 1.3
TBC1D3BA6NDS4 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
TBC1D3BA6NDS4 RASA4CP-201ENST00000424092 1398 ntBASIC23.15■■□□□ 1.3
TBC1D3BA6NDS4 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC23.15■■□□□ 1.3
TBC1D3BA6NDS4 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
TBC1D3BA6NDS4 RBM38-205ENST00000440234 686 ntTSL 2 BASIC23.15■■□□□ 1.3
TBC1D3BA6NDS4 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC23.15■■□□□ 1.3
TBC1D3BA6NDS4 CA15P2-201ENST00000611168 834 ntBASIC23.15■■□□□ 1.3
TBC1D3BA6NDS4 NKILA-201ENST00000613231 537 ntTSL 4 BASIC23.15■■□□□ 1.3
TBC1D3BA6NDS4 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
TBC1D3BA6NDS4 AC009086.3-201ENST00000623486 1008 ntBASIC23.15■■□□□ 1.3
TBC1D3BA6NDS4 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC23.15■■□□□ 1.3
TBC1D3BA6NDS4 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
TBC1D3BA6NDS4 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
TBC1D3BA6NDS4 AC006455.2-201ENST00000429931 906 ntBASIC23.14■■□□□ 1.29
TBC1D3BA6NDS4 AC027682.1-201ENST00000562846 899 ntBASIC23.14■■□□□ 1.29
TBC1D3BA6NDS4 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.29
TBC1D3BA6NDS4 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.29
TBC1D3BA6NDS4 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
TBC1D3BA6NDS4 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
TBC1D3BA6NDS4 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC23.14■■□□□ 1.29
TBC1D3BA6NDS4 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
TBC1D3BA6NDS4 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC23.13■■□□□ 1.29
TBC1D3BA6NDS4 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
TBC1D3BA6NDS4 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
TBC1D3BA6NDS4 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC23.13■■□□□ 1.29
TBC1D3BA6NDS4 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC23.13■■□□□ 1.29
TBC1D3BA6NDS4 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
TBC1D3BA6NDS4 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
TBC1D3BA6NDS4 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC23.12■■□□□ 1.29
TBC1D3BA6NDS4 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
TBC1D3BA6NDS4 AC135731.1-201ENST00000569415 2548 ntBASIC23.12■■□□□ 1.29
TBC1D3BA6NDS4 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
TBC1D3BA6NDS4 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
TBC1D3BA6NDS4 AC026271.2-201ENST00000428091 497 ntBASIC23.12■■□□□ 1.29
TBC1D3BA6NDS4 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
TBC1D3BA6NDS4 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
TBC1D3BA6NDS4 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC23.12■■□□□ 1.29
TBC1D3BA6NDS4 AP003733.4-201ENST00000623785 1697 ntBASIC23.12■■□□□ 1.29
TBC1D3BA6NDS4 VGF-203ENST00000611537 1622 ntTSL 5 BASIC23.11■■□□□ 1.29
TBC1D3BA6NDS4 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
TBC1D3BA6NDS4 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
TBC1D3BA6NDS4 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
TBC1D3BA6NDS4 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
TBC1D3BA6NDS4 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
TBC1D3BA6NDS4 MIR3181-201ENST00000578512 73 ntBASIC23.11■■□□□ 1.29
TBC1D3BA6NDS4 AC136469.2-201ENST00000623944 1028 ntBASIC23.11■■□□□ 1.29
TBC1D3BA6NDS4 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
TBC1D3BA6NDS4 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
TBC1D3BA6NDS4 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
TBC1D3BA6NDS4 AC099791.1-201ENST00000416440 715 ntBASIC23.1■■□□□ 1.29
TBC1D3BA6NDS4 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC23.1■■□□□ 1.29
TBC1D3BA6NDS4 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
TBC1D3BA6NDS4 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
TBC1D3BA6NDS4 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
TBC1D3BA6NDS4 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
TBC1D3BA6NDS4 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
TBC1D3BA6NDS4 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC23.09■■□□□ 1.29
TBC1D3BA6NDS4 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
TBC1D3BA6NDS4 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
TBC1D3BA6NDS4 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.29
TBC1D3BA6NDS4 CREM-210ENST00000374721 2020 ntTSL 5 BASIC23.08■■□□□ 1.29
TBC1D3BA6NDS4 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC23.08■■□□□ 1.29
TBC1D3BA6NDS4 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
TBC1D3BA6NDS4 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
TBC1D3BA6NDS4 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
TBC1D3BA6NDS4 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.28
TBC1D3BA6NDS4 EI24-204ENST00000527235 1625 ntTSL 5 BASIC23.08■■□□□ 1.28
TBC1D3BA6NDS4 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC23.08■■□□□ 1.28
TBC1D3BA6NDS4 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC23.07■■□□□ 1.28
TBC1D3BA6NDS4 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
TBC1D3BA6NDS4 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
TBC1D3BA6NDS4 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
TBC1D3BA6NDS4 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC23.07■■□□□ 1.28
TBC1D3BA6NDS4 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC23.07■■□□□ 1.28
TBC1D3BA6NDS4 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC23.07■■□□□ 1.28
TBC1D3BA6NDS4 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC23.07■■□□□ 1.28
TBC1D3BA6NDS4 MIR5787-201ENST00000611784 55 ntBASIC23.07■■□□□ 1.28
TBC1D3BA6NDS4 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
TBC1D3BA6NDS4 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC23.07■■□□□ 1.28
TBC1D3BA6NDS4 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
TBC1D3BA6NDS4 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
TBC1D3BA6NDS4 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
TBC1D3BA6NDS4 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC23.06■■□□□ 1.28
TBC1D3BA6NDS4 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC23.06■■□□□ 1.28
TBC1D3BA6NDS4 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC23.06■■□□□ 1.28
TBC1D3BA6NDS4 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC23.06■■□□□ 1.28
TBC1D3BA6NDS4 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
TBC1D3BA6NDS4 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
TBC1D3BA6NDS4 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
TBC1D3BA6NDS4 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC23.05■■□□□ 1.28
TBC1D3BA6NDS4 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
TBC1D3BA6NDS4 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
TBC1D3BA6NDS4 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms