Protein–RNA interactions for Protein: Q9Y6A2

CYP46A1, Cholesterol 24-hydroxylase, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP46A1Q9Y6A2 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
CYP46A1Q9Y6A2 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
CYP46A1Q9Y6A2 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
CYP46A1Q9Y6A2 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
CYP46A1Q9Y6A2 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
CYP46A1Q9Y6A2 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
CYP46A1Q9Y6A2 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
CYP46A1Q9Y6A2 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC27.05■■□□□ 1.92
CYP46A1Q9Y6A2 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC27.05■■□□□ 1.92
CYP46A1Q9Y6A2 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC27.05■■□□□ 1.92
CYP46A1Q9Y6A2 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC27.05■■□□□ 1.92
CYP46A1Q9Y6A2 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC27.04■■□□□ 1.92
CYP46A1Q9Y6A2 YBX1P4-201ENST00000392794 808 ntBASIC27.04■■□□□ 1.92
CYP46A1Q9Y6A2 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC27.04■■□□□ 1.92
CYP46A1Q9Y6A2 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
CYP46A1Q9Y6A2 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
CYP46A1Q9Y6A2 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
CYP46A1Q9Y6A2 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
CYP46A1Q9Y6A2 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC27.03■■□□□ 1.92
CYP46A1Q9Y6A2 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC27.03■■□□□ 1.92
CYP46A1Q9Y6A2 ANOS2P-203ENST00000472227 1816 ntBASIC27.03■■□□□ 1.92
CYP46A1Q9Y6A2 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC27.03■■□□□ 1.92
CYP46A1Q9Y6A2 AC103724.3-201ENST00000564481 992 ntBASIC27.03■■□□□ 1.92
CYP46A1Q9Y6A2 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC27.02■■□□□ 1.92
CYP46A1Q9Y6A2 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
CYP46A1Q9Y6A2 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC27.02■■□□□ 1.92
CYP46A1Q9Y6A2 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC27.02■■□□□ 1.92
CYP46A1Q9Y6A2 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC27.02■■□□□ 1.92
CYP46A1Q9Y6A2 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC27.01■■□□□ 1.92
CYP46A1Q9Y6A2 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC27.01■■□□□ 1.92
CYP46A1Q9Y6A2 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC27.01■■□□□ 1.92
CYP46A1Q9Y6A2 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
CYP46A1Q9Y6A2 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC27.01■■□□□ 1.91
CYP46A1Q9Y6A2 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC27.01■■□□□ 1.91
CYP46A1Q9Y6A2 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
CYP46A1Q9Y6A2 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC27.01■■□□□ 1.91
CYP46A1Q9Y6A2 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
CYP46A1Q9Y6A2 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC27■■□□□ 1.91
CYP46A1Q9Y6A2 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
CYP46A1Q9Y6A2 AC068473.5-201ENST00000616428 2072 ntBASIC27■■□□□ 1.91
CYP46A1Q9Y6A2 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC27■■□□□ 1.91
CYP46A1Q9Y6A2 AC133561.1-201ENST00000568600 2415 ntBASIC26.99■■□□□ 1.91
CYP46A1Q9Y6A2 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC26.99■■□□□ 1.91
CYP46A1Q9Y6A2 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC26.99■■□□□ 1.91
CYP46A1Q9Y6A2 AC004448.1-201ENST00000458332 883 ntBASIC26.99■■□□□ 1.91
CYP46A1Q9Y6A2 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC26.99■■□□□ 1.91
CYP46A1Q9Y6A2 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC26.99■■□□□ 1.91
CYP46A1Q9Y6A2 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC26.98■■□□□ 1.91
CYP46A1Q9Y6A2 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
CYP46A1Q9Y6A2 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC26.98■■□□□ 1.91
CYP46A1Q9Y6A2 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC26.98■■□□□ 1.91
CYP46A1Q9Y6A2 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC26.98■■□□□ 1.91
CYP46A1Q9Y6A2 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
CYP46A1Q9Y6A2 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC26.98■■□□□ 1.91
CYP46A1Q9Y6A2 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
CYP46A1Q9Y6A2 ME2-208ENST00000638937 2471 ntTSL 5 BASIC26.97■■□□□ 1.91
CYP46A1Q9Y6A2 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC26.97■■□□□ 1.91
CYP46A1Q9Y6A2 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC26.97■■□□□ 1.91
CYP46A1Q9Y6A2 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
CYP46A1Q9Y6A2 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
CYP46A1Q9Y6A2 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
CYP46A1Q9Y6A2 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
CYP46A1Q9Y6A2 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC26.96■■□□□ 1.91
CYP46A1Q9Y6A2 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC26.96■■□□□ 1.91
CYP46A1Q9Y6A2 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
CYP46A1Q9Y6A2 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
CYP46A1Q9Y6A2 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
CYP46A1Q9Y6A2 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC26.96■■□□□ 1.91
CYP46A1Q9Y6A2 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC26.96■■□□□ 1.91
CYP46A1Q9Y6A2 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC26.96■■□□□ 1.91
CYP46A1Q9Y6A2 AC092068.2-201ENST00000590491 1708 ntBASIC26.96■■□□□ 1.91
CYP46A1Q9Y6A2 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC26.95■■□□□ 1.9
CYP46A1Q9Y6A2 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC26.95■■□□□ 1.9
CYP46A1Q9Y6A2 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
CYP46A1Q9Y6A2 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
CYP46A1Q9Y6A2 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
CYP46A1Q9Y6A2 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
CYP46A1Q9Y6A2 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC26.94■■□□□ 1.9
CYP46A1Q9Y6A2 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
CYP46A1Q9Y6A2 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC26.94■■□□□ 1.9
CYP46A1Q9Y6A2 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
CYP46A1Q9Y6A2 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
CYP46A1Q9Y6A2 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC26.94■■□□□ 1.9
CYP46A1Q9Y6A2 TK2-216ENST00000564917 1156 ntTSL 3 BASIC26.94■■□□□ 1.9
CYP46A1Q9Y6A2 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC26.94■■□□□ 1.9
CYP46A1Q9Y6A2 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
CYP46A1Q9Y6A2 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
CYP46A1Q9Y6A2 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
CYP46A1Q9Y6A2 C9orf163-202ENST00000624034 2573 ntBASIC26.93■■□□□ 1.9
CYP46A1Q9Y6A2 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
CYP46A1Q9Y6A2 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC26.93■■□□□ 1.9
CYP46A1Q9Y6A2 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC26.93■■□□□ 1.9
CYP46A1Q9Y6A2 H19-210ENST00000439725 1929 ntTSL 2 BASIC26.92■■□□□ 1.9
CYP46A1Q9Y6A2 AC012676.1-201ENST00000574705 1949 ntBASIC26.92■■□□□ 1.9
CYP46A1Q9Y6A2 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
CYP46A1Q9Y6A2 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
CYP46A1Q9Y6A2 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC26.92■■□□□ 1.9
CYP46A1Q9Y6A2 AL031848.2-201ENST00000607670 837 ntBASIC26.92■■□□□ 1.9
CYP46A1Q9Y6A2 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
CYP46A1Q9Y6A2 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms