Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
RHBDD3Q9Y3P4 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RHBDD3Q9Y3P4 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
RHBDD3Q9Y3P4 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RHBDD3Q9Y3P4 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
RHBDD3Q9Y3P4 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
RHBDD3Q9Y3P4 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RHBDD3Q9Y3P4 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RHBDD3Q9Y3P4 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RHBDD3Q9Y3P4 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RHBDD3Q9Y3P4 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
RHBDD3Q9Y3P4 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC19.87■□□□□ 0.77
RHBDD3Q9Y3P4 AC011551.1-201ENST00000614101 683 ntBASIC19.87■□□□□ 0.77
RHBDD3Q9Y3P4 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
RHBDD3Q9Y3P4 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RHBDD3Q9Y3P4 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
RHBDD3Q9Y3P4 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
RHBDD3Q9Y3P4 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RHBDD3Q9Y3P4 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RHBDD3Q9Y3P4 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC19.86■□□□□ 0.77
RHBDD3Q9Y3P4 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
RHBDD3Q9Y3P4 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC19.86■□□□□ 0.77
RHBDD3Q9Y3P4 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RHBDD3Q9Y3P4 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
RHBDD3Q9Y3P4 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC19.86■□□□□ 0.77
RHBDD3Q9Y3P4 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC19.86■□□□□ 0.77
RHBDD3Q9Y3P4 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC19.86■□□□□ 0.77
RHBDD3Q9Y3P4 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RHBDD3Q9Y3P4 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
RHBDD3Q9Y3P4 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RHBDD3Q9Y3P4 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
RHBDD3Q9Y3P4 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
RHBDD3Q9Y3P4 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC19.85■□□□□ 0.77
RHBDD3Q9Y3P4 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RHBDD3Q9Y3P4 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RHBDD3Q9Y3P4 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC19.85■□□□□ 0.77
RHBDD3Q9Y3P4 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RHBDD3Q9Y3P4 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RHBDD3Q9Y3P4 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
RHBDD3Q9Y3P4 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RHBDD3Q9Y3P4 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RHBDD3Q9Y3P4 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
RHBDD3Q9Y3P4 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
RHBDD3Q9Y3P4 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RHBDD3Q9Y3P4 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RHBDD3Q9Y3P4 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC19.84■□□□□ 0.77
RHBDD3Q9Y3P4 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC19.84■□□□□ 0.77
RHBDD3Q9Y3P4 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RHBDD3Q9Y3P4 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RHBDD3Q9Y3P4 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RHBDD3Q9Y3P4 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC19.84■□□□□ 0.77
RHBDD3Q9Y3P4 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RHBDD3Q9Y3P4 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
RHBDD3Q9Y3P4 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC19.84■□□□□ 0.77
RHBDD3Q9Y3P4 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RHBDD3Q9Y3P4 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RHBDD3Q9Y3P4 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RHBDD3Q9Y3P4 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RHBDD3Q9Y3P4 GAK-223ENST00000628912 497 ntTSL 5 BASIC19.83■□□□□ 0.77
RHBDD3Q9Y3P4 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RHBDD3Q9Y3P4 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC19.83■□□□□ 0.76
RHBDD3Q9Y3P4 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
RHBDD3Q9Y3P4 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
RHBDD3Q9Y3P4 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
RHBDD3Q9Y3P4 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RHBDD3Q9Y3P4 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
RHBDD3Q9Y3P4 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
RHBDD3Q9Y3P4 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC19.82■□□□□ 0.76
RHBDD3Q9Y3P4 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC19.82■□□□□ 0.76
RHBDD3Q9Y3P4 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC19.82■□□□□ 0.76
RHBDD3Q9Y3P4 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC19.82■□□□□ 0.76
RHBDD3Q9Y3P4 AC120024.1-201ENST00000562672 995 ntBASIC19.82■□□□□ 0.76
RHBDD3Q9Y3P4 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC19.82■□□□□ 0.76
RHBDD3Q9Y3P4 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC19.82■□□□□ 0.76
RHBDD3Q9Y3P4 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RHBDD3Q9Y3P4 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RHBDD3Q9Y3P4 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RHBDD3Q9Y3P4 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RHBDD3Q9Y3P4 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC19.81■□□□□ 0.76
RHBDD3Q9Y3P4 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RHBDD3Q9Y3P4 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC19.81■□□□□ 0.76
RHBDD3Q9Y3P4 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
RHBDD3Q9Y3P4 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC19.81■□□□□ 0.76
RHBDD3Q9Y3P4 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RHBDD3Q9Y3P4 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
RHBDD3Q9Y3P4 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RHBDD3Q9Y3P4 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RHBDD3Q9Y3P4 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
RHBDD3Q9Y3P4 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RHBDD3Q9Y3P4 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
RHBDD3Q9Y3P4 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RHBDD3Q9Y3P4 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
RHBDD3Q9Y3P4 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC19.8■□□□□ 0.76
RHBDD3Q9Y3P4 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
RHBDD3Q9Y3P4 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC19.79■□□□□ 0.76
RHBDD3Q9Y3P4 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RHBDD3Q9Y3P4 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RHBDD3Q9Y3P4 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RHBDD3Q9Y3P4 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RHBDD3Q9Y3P4 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms