Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
RHBDD3Q9Y3P4 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RHBDD3Q9Y3P4 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
RHBDD3Q9Y3P4 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RHBDD3Q9Y3P4 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
RHBDD3Q9Y3P4 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
RHBDD3Q9Y3P4 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RHBDD3Q9Y3P4 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RHBDD3Q9Y3P4 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RHBDD3Q9Y3P4 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RHBDD3Q9Y3P4 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
RHBDD3Q9Y3P4 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC19.87■□□□□ 0.77
RHBDD3Q9Y3P4 AC011551.1-201ENST00000614101 683 ntBASIC19.87■□□□□ 0.77
RHBDD3Q9Y3P4 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
RHBDD3Q9Y3P4 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RHBDD3Q9Y3P4 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
RHBDD3Q9Y3P4 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
RHBDD3Q9Y3P4 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RHBDD3Q9Y3P4 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RHBDD3Q9Y3P4 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC19.86■□□□□ 0.77
RHBDD3Q9Y3P4 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
RHBDD3Q9Y3P4 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC19.86■□□□□ 0.77
RHBDD3Q9Y3P4 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RHBDD3Q9Y3P4 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
RHBDD3Q9Y3P4 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC19.86■□□□□ 0.77
RHBDD3Q9Y3P4 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC19.86■□□□□ 0.77
RHBDD3Q9Y3P4 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC19.86■□□□□ 0.77
RHBDD3Q9Y3P4 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RHBDD3Q9Y3P4 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
RHBDD3Q9Y3P4 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RHBDD3Q9Y3P4 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
RHBDD3Q9Y3P4 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
RHBDD3Q9Y3P4 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC19.85■□□□□ 0.77
RHBDD3Q9Y3P4 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RHBDD3Q9Y3P4 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RHBDD3Q9Y3P4 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC19.85■□□□□ 0.77
RHBDD3Q9Y3P4 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RHBDD3Q9Y3P4 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RHBDD3Q9Y3P4 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
RHBDD3Q9Y3P4 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RHBDD3Q9Y3P4 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RHBDD3Q9Y3P4 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
RHBDD3Q9Y3P4 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
RHBDD3Q9Y3P4 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RHBDD3Q9Y3P4 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RHBDD3Q9Y3P4 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC19.84■□□□□ 0.77
RHBDD3Q9Y3P4 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC19.84■□□□□ 0.77
RHBDD3Q9Y3P4 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RHBDD3Q9Y3P4 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RHBDD3Q9Y3P4 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RHBDD3Q9Y3P4 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC19.84■□□□□ 0.77
RHBDD3Q9Y3P4 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RHBDD3Q9Y3P4 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
RHBDD3Q9Y3P4 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC19.84■□□□□ 0.77
RHBDD3Q9Y3P4 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RHBDD3Q9Y3P4 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RHBDD3Q9Y3P4 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RHBDD3Q9Y3P4 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RHBDD3Q9Y3P4 GAK-223ENST00000628912 497 ntTSL 5 BASIC19.83■□□□□ 0.77
RHBDD3Q9Y3P4 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RHBDD3Q9Y3P4 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC19.83■□□□□ 0.76
RHBDD3Q9Y3P4 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
RHBDD3Q9Y3P4 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
RHBDD3Q9Y3P4 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
RHBDD3Q9Y3P4 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RHBDD3Q9Y3P4 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
RHBDD3Q9Y3P4 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
RHBDD3Q9Y3P4 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC19.82■□□□□ 0.76
RHBDD3Q9Y3P4 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC19.82■□□□□ 0.76
RHBDD3Q9Y3P4 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC19.82■□□□□ 0.76
RHBDD3Q9Y3P4 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC19.82■□□□□ 0.76
RHBDD3Q9Y3P4 AC120024.1-201ENST00000562672 995 ntBASIC19.82■□□□□ 0.76
RHBDD3Q9Y3P4 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC19.82■□□□□ 0.76
RHBDD3Q9Y3P4 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC19.82■□□□□ 0.76
RHBDD3Q9Y3P4 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RHBDD3Q9Y3P4 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RHBDD3Q9Y3P4 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RHBDD3Q9Y3P4 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RHBDD3Q9Y3P4 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC19.81■□□□□ 0.76
RHBDD3Q9Y3P4 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RHBDD3Q9Y3P4 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC19.81■□□□□ 0.76
RHBDD3Q9Y3P4 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
RHBDD3Q9Y3P4 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC19.81■□□□□ 0.76
RHBDD3Q9Y3P4 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RHBDD3Q9Y3P4 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
RHBDD3Q9Y3P4 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RHBDD3Q9Y3P4 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RHBDD3Q9Y3P4 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
RHBDD3Q9Y3P4 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RHBDD3Q9Y3P4 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
RHBDD3Q9Y3P4 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RHBDD3Q9Y3P4 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
RHBDD3Q9Y3P4 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC19.8■□□□□ 0.76
RHBDD3Q9Y3P4 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
RHBDD3Q9Y3P4 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC19.79■□□□□ 0.76
RHBDD3Q9Y3P4 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RHBDD3Q9Y3P4 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RHBDD3Q9Y3P4 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RHBDD3Q9Y3P4 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RHBDD3Q9Y3P4 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 13 ms