Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC23.66■■□□□ 1.38
RFX6Q8HWS3 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
RFX6Q8HWS3 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
RFX6Q8HWS3 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
RFX6Q8HWS3 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
RFX6Q8HWS3 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
RFX6Q8HWS3 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
RFX6Q8HWS3 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC23.65■■□□□ 1.38
RFX6Q8HWS3 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC23.65■■□□□ 1.38
RFX6Q8HWS3 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC23.65■■□□□ 1.38
RFX6Q8HWS3 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
RFX6Q8HWS3 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC23.65■■□□□ 1.38
RFX6Q8HWS3 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
RFX6Q8HWS3 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
RFX6Q8HWS3 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
RFX6Q8HWS3 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC23.65■■□□□ 1.38
RFX6Q8HWS3 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC23.65■■□□□ 1.38
RFX6Q8HWS3 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
RFX6Q8HWS3 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.38
RFX6Q8HWS3 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.38
RFX6Q8HWS3 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.38
RFX6Q8HWS3 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.38
RFX6Q8HWS3 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.38
RFX6Q8HWS3 YBX1P4-201ENST00000392794 808 ntBASIC23.64■■□□□ 1.37
RFX6Q8HWS3 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC23.64■■□□□ 1.37
RFX6Q8HWS3 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.37
RFX6Q8HWS3 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
RFX6Q8HWS3 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC23.64■■□□□ 1.37
RFX6Q8HWS3 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC23.64■■□□□ 1.37
RFX6Q8HWS3 ALDH1A3-203ENST00000557963 1670 ntBASIC23.64■■□□□ 1.37
RFX6Q8HWS3 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
RFX6Q8HWS3 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
RFX6Q8HWS3 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
RFX6Q8HWS3 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC23.63■■□□□ 1.37
RFX6Q8HWS3 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
RFX6Q8HWS3 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
RFX6Q8HWS3 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
RFX6Q8HWS3 NFE2L3P1-201ENST00000588207 1959 ntBASIC23.63■■□□□ 1.37
RFX6Q8HWS3 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC23.63■■□□□ 1.37
RFX6Q8HWS3 EI24-204ENST00000527235 1625 ntTSL 5 BASIC23.62■■□□□ 1.37
RFX6Q8HWS3 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
RFX6Q8HWS3 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
RFX6Q8HWS3 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC23.62■■□□□ 1.37
RFX6Q8HWS3 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
RFX6Q8HWS3 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC23.62■■□□□ 1.37
RFX6Q8HWS3 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC23.62■■□□□ 1.37
RFX6Q8HWS3 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC23.61■■□□□ 1.37
RFX6Q8HWS3 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
RFX6Q8HWS3 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC23.61■■□□□ 1.37
RFX6Q8HWS3 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
RFX6Q8HWS3 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC23.61■■□□□ 1.37
RFX6Q8HWS3 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
RFX6Q8HWS3 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
RFX6Q8HWS3 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC23.6■■□□□ 1.37
RFX6Q8HWS3 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC23.6■■□□□ 1.37
RFX6Q8HWS3 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC23.6■■□□□ 1.37
RFX6Q8HWS3 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC23.6■■□□□ 1.37
RFX6Q8HWS3 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
RFX6Q8HWS3 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
RFX6Q8HWS3 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
RFX6Q8HWS3 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
RFX6Q8HWS3 AC103724.3-201ENST00000564481 992 ntBASIC23.6■■□□□ 1.37
RFX6Q8HWS3 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC23.6■■□□□ 1.37
RFX6Q8HWS3 ANOS2P-203ENST00000472227 1816 ntBASIC23.6■■□□□ 1.37
RFX6Q8HWS3 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
RFX6Q8HWS3 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
RFX6Q8HWS3 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
RFX6Q8HWS3 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC23.6■■□□□ 1.37
RFX6Q8HWS3 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
RFX6Q8HWS3 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC23.6■■□□□ 1.37
RFX6Q8HWS3 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
RFX6Q8HWS3 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC23.59■■□□□ 1.37
RFX6Q8HWS3 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC23.59■■□□□ 1.37
RFX6Q8HWS3 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
RFX6Q8HWS3 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
RFX6Q8HWS3 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC23.59■■□□□ 1.37
RFX6Q8HWS3 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC23.58■■□□□ 1.37
RFX6Q8HWS3 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
RFX6Q8HWS3 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC23.58■■□□□ 1.37
RFX6Q8HWS3 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC23.58■■□□□ 1.37
RFX6Q8HWS3 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC23.58■■□□□ 1.37
RFX6Q8HWS3 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
RFX6Q8HWS3 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC23.57■■□□□ 1.36
RFX6Q8HWS3 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
RFX6Q8HWS3 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
RFX6Q8HWS3 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC23.57■■□□□ 1.36
RFX6Q8HWS3 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
RFX6Q8HWS3 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC23.57■■□□□ 1.36
RFX6Q8HWS3 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC23.57■■□□□ 1.36
RFX6Q8HWS3 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
RFX6Q8HWS3 AC133561.1-201ENST00000568600 2415 ntBASIC23.57■■□□□ 1.36
RFX6Q8HWS3 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC23.56■■□□□ 1.36
RFX6Q8HWS3 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
RFX6Q8HWS3 AC068473.5-201ENST00000616428 2072 ntBASIC23.56■■□□□ 1.36
RFX6Q8HWS3 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
RFX6Q8HWS3 ME2-208ENST00000638937 2471 ntTSL 5 BASIC23.56■■□□□ 1.36
RFX6Q8HWS3 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
RFX6Q8HWS3 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
RFX6Q8HWS3 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
RFX6Q8HWS3 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms