Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC33.11■■■□□ 2.89
CLTCL1P53675 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC33.11■■■□□ 2.89
CLTCL1P53675 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC33.11■■■□□ 2.89
CLTCL1P53675 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC33.11■■■□□ 2.89
CLTCL1P53675 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC33.11■■■□□ 2.89
CLTCL1P53675 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC33.11■■■□□ 2.89
CLTCL1P53675 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC33.11■■■□□ 2.89
CLTCL1P53675 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC33.1■■■□□ 2.89
CLTCL1P53675 HYI-206ENST00000372434 1025 ntTSL 5 BASIC33.1■■■□□ 2.89
CLTCL1P53675 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC33.1■■■□□ 2.89
CLTCL1P53675 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC33.1■■■□□ 2.89
CLTCL1P53675 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC33.1■■■□□ 2.89
CLTCL1P53675 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC33.1■■■□□ 2.89
CLTCL1P53675 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC33.1■■■□□ 2.89
CLTCL1P53675 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC33.1■■■□□ 2.89
CLTCL1P53675 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC33.1■■■□□ 2.89
CLTCL1P53675 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC33.1■■■□□ 2.89
CLTCL1P53675 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC33.1■■■□□ 2.89
CLTCL1P53675 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC33.1■■■□□ 2.89
CLTCL1P53675 RASA4CP-201ENST00000424092 1398 ntBASIC33.09■■■□□ 2.89
CLTCL1P53675 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC33.08■■■□□ 2.89
CLTCL1P53675 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC33.08■■■□□ 2.89
CLTCL1P53675 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC33.08■■■□□ 2.89
CLTCL1P53675 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC33.08■■■□□ 2.89
CLTCL1P53675 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC33.08■■■□□ 2.89
CLTCL1P53675 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC33.08■■■□□ 2.89
CLTCL1P53675 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC33.08■■■□□ 2.89
CLTCL1P53675 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC33.07■■■□□ 2.88
CLTCL1P53675 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC33.07■■■□□ 2.88
CLTCL1P53675 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC33.07■■■□□ 2.88
CLTCL1P53675 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
CLTCL1P53675 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC33.06■■■□□ 2.88
CLTCL1P53675 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC33.06■■■□□ 2.88
CLTCL1P53675 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC33.06■■■□□ 2.88
CLTCL1P53675 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC33.06■■■□□ 2.88
CLTCL1P53675 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC33.06■■■□□ 2.88
CLTCL1P53675 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC33.06■■■□□ 2.88
CLTCL1P53675 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
CLTCL1P53675 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
CLTCL1P53675 AC099791.1-201ENST00000416440 715 ntBASIC33.06■■■□□ 2.88
CLTCL1P53675 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC33.05■■■□□ 2.88
CLTCL1P53675 SNX3-202ENST00000349379 890 ntTSL 2 BASIC33.05■■■□□ 2.88
CLTCL1P53675 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC33.05■■■□□ 2.88
CLTCL1P53675 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC33.05■■■□□ 2.88
CLTCL1P53675 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC33.04■■■□□ 2.88
CLTCL1P53675 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC33.04■■■□□ 2.88
CLTCL1P53675 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC33.04■■■□□ 2.88
CLTCL1P53675 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC33.04■■■□□ 2.88
CLTCL1P53675 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC33.04■■■□□ 2.88
CLTCL1P53675 AC009086.3-201ENST00000623486 1008 ntBASIC33.03■■■□□ 2.88
CLTCL1P53675 AC241377.3-202ENST00000626088 1088 ntBASIC33.03■■■□□ 2.88
CLTCL1P53675 AC241585.3-202ENST00000628937 1088 ntBASIC33.03■■■□□ 2.88
CLTCL1P53675 AC245100.8-202ENST00000629247 1058 ntBASIC33.03■■■□□ 2.88
CLTCL1P53675 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC33.03■■■□□ 2.88
CLTCL1P53675 AL161729.1-201ENST00000604104 1402 ntBASIC33.03■■■□□ 2.88
CLTCL1P53675 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC33.03■■■□□ 2.88
CLTCL1P53675 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC33.02■■■□□ 2.88
CLTCL1P53675 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC33.02■■■□□ 2.88
CLTCL1P53675 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC33.02■■■□□ 2.88
CLTCL1P53675 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC33.02■■■□□ 2.88
CLTCL1P53675 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC33.02■■■□□ 2.88
CLTCL1P53675 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC33.02■■■□□ 2.88
CLTCL1P53675 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC33.01■■■□□ 2.88
CLTCL1P53675 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC33.01■■■□□ 2.87
CLTCL1P53675 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC33.01■■■□□ 2.87
CLTCL1P53675 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC33.01■■■□□ 2.87
CLTCL1P53675 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC33.01■■■□□ 2.87
CLTCL1P53675 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC33.01■■■□□ 2.87
CLTCL1P53675 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC33■■■□□ 2.87
CLTCL1P53675 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC33■■■□□ 2.87
CLTCL1P53675 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC33■■■□□ 2.87
CLTCL1P53675 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC33■■■□□ 2.87
CLTCL1P53675 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC33■■■□□ 2.87
CLTCL1P53675 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC33■■■□□ 2.87
CLTCL1P53675 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC33■■■□□ 2.87
CLTCL1P53675 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC33■■■□□ 2.87
CLTCL1P53675 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC32.99■■■□□ 2.87
CLTCL1P53675 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC32.99■■■□□ 2.87
CLTCL1P53675 HES6-206ENST00000409574 738 ntTSL 2 BASIC32.99■■■□□ 2.87
CLTCL1P53675 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC32.99■■■□□ 2.87
CLTCL1P53675 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC32.99■■■□□ 2.87
CLTCL1P53675 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC32.99■■■□□ 2.87
CLTCL1P53675 EI24-204ENST00000527235 1625 ntTSL 5 BASIC32.99■■■□□ 2.87
CLTCL1P53675 VGF-203ENST00000611537 1622 ntTSL 5 BASIC32.99■■■□□ 2.87
CLTCL1P53675 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC32.99■■■□□ 2.87
CLTCL1P53675 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC32.99■■■□□ 2.87
CLTCL1P53675 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC32.98■■■□□ 2.87
CLTCL1P53675 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC32.98■■■□□ 2.87
CLTCL1P53675 RBM38-205ENST00000440234 686 ntTSL 2 BASIC32.98■■■□□ 2.87
CLTCL1P53675 MIR5787-201ENST00000611784 55 ntBASIC32.98■■■□□ 2.87
CLTCL1P53675 MIR6821-201ENST00000617625 74 ntBASIC32.98■■■□□ 2.87
CLTCL1P53675 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC32.97■■■□□ 2.87
CLTCL1P53675 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC32.97■■■□□ 2.87
CLTCL1P53675 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC32.97■■■□□ 2.87
CLTCL1P53675 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC32.97■■■□□ 2.87
CLTCL1P53675 AC008764.7-201ENST00000593779 1081 ntBASIC32.97■■■□□ 2.87
CLTCL1P53675 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC32.97■■■□□ 2.87
CLTCL1P53675 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC32.97■■■□□ 2.87
CLTCL1P53675 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC32.97■■■□□ 2.87
CLTCL1P53675 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC32.96■■■□□ 2.87
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms