Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
NEK3P51956 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC23.45■■□□□ 1.34
NEK3P51956 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC23.45■■□□□ 1.34
NEK3P51956 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC23.45■■□□□ 1.34
NEK3P51956 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC23.45■■□□□ 1.34
NEK3P51956 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
NEK3P51956 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
NEK3P51956 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
NEK3P51956 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
NEK3P51956 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
NEK3P51956 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
NEK3P51956 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC23.44■■□□□ 1.34
NEK3P51956 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC23.44■■□□□ 1.34
NEK3P51956 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC23.44■■□□□ 1.34
NEK3P51956 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC23.44■■□□□ 1.34
NEK3P51956 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC23.44■■□□□ 1.34
NEK3P51956 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC23.44■■□□□ 1.34
NEK3P51956 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC23.44■■□□□ 1.34
NEK3P51956 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
NEK3P51956 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC23.43■■□□□ 1.34
NEK3P51956 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC23.43■■□□□ 1.34
NEK3P51956 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC23.43■■□□□ 1.34
NEK3P51956 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC23.43■■□□□ 1.34
NEK3P51956 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC23.43■■□□□ 1.34
NEK3P51956 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
NEK3P51956 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC23.43■■□□□ 1.34
NEK3P51956 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC23.43■■□□□ 1.34
NEK3P51956 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
NEK3P51956 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC23.43■■□□□ 1.34
NEK3P51956 LSR-205ENST00000427250 1606 ntTSL 2 BASIC23.43■■□□□ 1.34
NEK3P51956 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC23.43■■□□□ 1.34
NEK3P51956 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC23.42■■□□□ 1.34
NEK3P51956 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
NEK3P51956 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
NEK3P51956 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC23.42■■□□□ 1.34
NEK3P51956 MTDHP2-201ENST00000601468 714 ntBASIC23.42■■□□□ 1.34
NEK3P51956 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC23.42■■□□□ 1.34
NEK3P51956 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC23.41■■□□□ 1.34
NEK3P51956 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
NEK3P51956 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
NEK3P51956 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
NEK3P51956 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC23.41■■□□□ 1.34
NEK3P51956 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC23.41■■□□□ 1.34
NEK3P51956 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC23.41■■□□□ 1.34
NEK3P51956 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
NEK3P51956 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC23.41■■□□□ 1.34
NEK3P51956 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
NEK3P51956 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC23.41■■□□□ 1.34
NEK3P51956 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
NEK3P51956 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC23.4■■□□□ 1.34
NEK3P51956 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC23.4■■□□□ 1.34
NEK3P51956 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC23.4■■□□□ 1.34
NEK3P51956 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC23.4■■□□□ 1.34
NEK3P51956 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC23.4■■□□□ 1.34
NEK3P51956 AC010997.5-201ENST00000609182 354 ntBASIC23.4■■□□□ 1.34
NEK3P51956 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
NEK3P51956 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC23.4■■□□□ 1.34
NEK3P51956 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
NEK3P51956 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
NEK3P51956 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC23.39■■□□□ 1.33
NEK3P51956 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
NEK3P51956 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
NEK3P51956 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC23.39■■□□□ 1.33
NEK3P51956 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC23.38■■□□□ 1.33
NEK3P51956 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC23.38■■□□□ 1.33
NEK3P51956 ABCB10P4-201ENST00000566803 2184 ntBASIC23.38■■□□□ 1.33
NEK3P51956 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
NEK3P51956 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC23.38■■□□□ 1.33
NEK3P51956 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC23.38■■□□□ 1.33
NEK3P51956 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC23.38■■□□□ 1.33
NEK3P51956 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC23.38■■□□□ 1.33
NEK3P51956 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC23.38■■□□□ 1.33
NEK3P51956 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
NEK3P51956 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC23.37■■□□□ 1.33
NEK3P51956 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC23.37■■□□□ 1.33
NEK3P51956 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC23.37■■□□□ 1.33
NEK3P51956 CLTA-210ENST00000540080 989 ntTSL 2 BASIC23.37■■□□□ 1.33
NEK3P51956 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
NEK3P51956 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
NEK3P51956 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
NEK3P51956 SHD-204ENST00000599689 1729 ntTSL 5 BASIC23.36■■□□□ 1.33
NEK3P51956 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC23.36■■□□□ 1.33
NEK3P51956 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC23.36■■□□□ 1.33
NEK3P51956 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
NEK3P51956 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
NEK3P51956 LBH-205ENST00000407930 756 ntTSL 2 BASIC23.35■■□□□ 1.33
NEK3P51956 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC23.35■■□□□ 1.33
NEK3P51956 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
NEK3P51956 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
NEK3P51956 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC23.34■■□□□ 1.33
NEK3P51956 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
NEK3P51956 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
NEK3P51956 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
NEK3P51956 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.33
NEK3P51956 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC23.33■■□□□ 1.33
NEK3P51956 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC23.33■■□□□ 1.33
NEK3P51956 MIR6724-1-201ENST00000616420 92 ntBASIC23.33■■□□□ 1.33
NEK3P51956 MIR6724-2-201ENST00000616483 92 ntBASIC23.33■■□□□ 1.33
NEK3P51956 MIR6724-4-201ENST00000617390 92 ntBASIC23.33■■□□□ 1.33
NEK3P51956 MIR6724-3-201ENST00000622482 92 ntBASIC23.33■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms