Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SFTPBP07988 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC19.65■□□□□ 0.74
SFTPBP07988 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SFTPBP07988 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
SFTPBP07988 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SFTPBP07988 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
SFTPBP07988 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SFTPBP07988 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
SFTPBP07988 IDNK-201ENST00000376417 511 ntTSL 5 BASIC19.64■□□□□ 0.73
SFTPBP07988 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SFTPBP07988 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SFTPBP07988 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
SFTPBP07988 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC19.64■□□□□ 0.73
SFTPBP07988 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC19.64■□□□□ 0.73
SFTPBP07988 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
SFTPBP07988 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
SFTPBP07988 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SFTPBP07988 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SFTPBP07988 LONRF2P2-201ENST00000439212 571 ntBASIC19.63■□□□□ 0.73
SFTPBP07988 MTX2-204ENST00000443241 799 ntTSL 3 BASIC19.63■□□□□ 0.73
SFTPBP07988 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC19.63■□□□□ 0.73
SFTPBP07988 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
SFTPBP07988 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC19.62■□□□□ 0.73
SFTPBP07988 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SFTPBP07988 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SFTPBP07988 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SFTPBP07988 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SFTPBP07988 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SFTPBP07988 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
SFTPBP07988 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SFTPBP07988 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC19.62■□□□□ 0.73
SFTPBP07988 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SFTPBP07988 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
SFTPBP07988 AC079834.2-201ENST00000609776 1949 ntBASIC19.61■□□□□ 0.73
SFTPBP07988 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SFTPBP07988 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC19.61■□□□□ 0.73
SFTPBP07988 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SFTPBP07988 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
SFTPBP07988 SSSCA1-AS1-201ENST00000567594 614 ntBASIC19.61■□□□□ 0.73
SFTPBP07988 AL451085.2-201ENST00000605085 799 ntBASIC19.61■□□□□ 0.73
SFTPBP07988 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SFTPBP07988 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
SFTPBP07988 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SFTPBP07988 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC19.61■□□□□ 0.73
SFTPBP07988 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
SFTPBP07988 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
SFTPBP07988 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC19.6■□□□□ 0.73
SFTPBP07988 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SFTPBP07988 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
SFTPBP07988 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SFTPBP07988 MIR4508-201ENST00000584178 70 ntBASIC19.6■□□□□ 0.73
SFTPBP07988 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SFTPBP07988 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
SFTPBP07988 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SFTPBP07988 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SFTPBP07988 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SFTPBP07988 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SFTPBP07988 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC19.6■□□□□ 0.73
SFTPBP07988 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SFTPBP07988 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SFTPBP07988 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
SFTPBP07988 AC019171.1-201ENST00000601251 1056 ntBASIC19.59■□□□□ 0.73
SFTPBP07988 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SFTPBP07988 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
SFTPBP07988 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC19.59■□□□□ 0.73
SFTPBP07988 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SFTPBP07988 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
SFTPBP07988 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
SFTPBP07988 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SFTPBP07988 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SFTPBP07988 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SFTPBP07988 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC19.59■□□□□ 0.73
SFTPBP07988 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC19.59■□□□□ 0.73
SFTPBP07988 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SFTPBP07988 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SFTPBP07988 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
SFTPBP07988 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SFTPBP07988 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
SFTPBP07988 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
SFTPBP07988 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SFTPBP07988 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
SFTPBP07988 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
SFTPBP07988 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
SFTPBP07988 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SFTPBP07988 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
SFTPBP07988 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SFTPBP07988 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SFTPBP07988 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC19.57■□□□□ 0.72
SFTPBP07988 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SFTPBP07988 AC103724.3-201ENST00000564481 992 ntBASIC19.57■□□□□ 0.72
SFTPBP07988 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC19.57■□□□□ 0.72
SFTPBP07988 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC19.57■□□□□ 0.72
SFTPBP07988 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SFTPBP07988 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SFTPBP07988 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SFTPBP07988 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
SFTPBP07988 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC19.56■□□□□ 0.72
SFTPBP07988 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SFTPBP07988 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
SFTPBP07988 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms