Protein–RNA interactions for Protein: P04155

TFF1, Trefoil factor 1, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFF1P04155 EI24-204ENST00000527235 1625 ntTSL 5 BASIC19.14■□□□□ 0.65
TFF1P04155 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TFF1P04155 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TFF1P04155 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC19.14■□□□□ 0.65
TFF1P04155 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TFF1P04155 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
TFF1P04155 OR2A1-AS1-204ENST00000470435 602 ntBASIC19.13■□□□□ 0.65
TFF1P04155 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC19.13■□□□□ 0.65
TFF1P04155 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
TFF1P04155 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TFF1P04155 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
TFF1P04155 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC19.13■□□□□ 0.65
TFF1P04155 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
TFF1P04155 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC19.13■□□□□ 0.65
TFF1P04155 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TFF1P04155 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TFF1P04155 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
TFF1P04155 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
TFF1P04155 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TFF1P04155 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC19.12■□□□□ 0.65
TFF1P04155 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TFF1P04155 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
TFF1P04155 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TFF1P04155 Z92544.1-202ENST00000571933 1220 ntBASIC19.12■□□□□ 0.65
TFF1P04155 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
TFF1P04155 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TFF1P04155 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TFF1P04155 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TFF1P04155 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TFF1P04155 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC19.11■□□□□ 0.65
TFF1P04155 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TFF1P04155 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC19.11■□□□□ 0.65
TFF1P04155 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
TFF1P04155 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TFF1P04155 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TFF1P04155 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
TFF1P04155 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC19.11■□□□□ 0.65
TFF1P04155 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
TFF1P04155 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TFF1P04155 CREM-229ENST00000474362 1030 ntTSL 2 BASIC19.11■□□□□ 0.65
TFF1P04155 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC19.11■□□□□ 0.65
TFF1P04155 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
TFF1P04155 AC092028.1-203ENST00000608262 953 ntBASIC19.11■□□□□ 0.65
TFF1P04155 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC19.11■□□□□ 0.65
TFF1P04155 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TFF1P04155 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TFF1P04155 ALDH1A3-203ENST00000557963 1670 ntBASIC19.11■□□□□ 0.65
TFF1P04155 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC19.11■□□□□ 0.65
TFF1P04155 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC19.1■□□□□ 0.65
TFF1P04155 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TFF1P04155 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TFF1P04155 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
TFF1P04155 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TFF1P04155 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC19.1■□□□□ 0.65
TFF1P04155 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
TFF1P04155 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC19.1■□□□□ 0.65
TFF1P04155 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TFF1P04155 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TFF1P04155 UNC93B8-201ENST00000511903 705 ntBASIC19.1■□□□□ 0.65
TFF1P04155 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TFF1P04155 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TFF1P04155 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
TFF1P04155 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TFF1P04155 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TFF1P04155 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
TFF1P04155 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TFF1P04155 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC19.1■□□□□ 0.65
TFF1P04155 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TFF1P04155 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TFF1P04155 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TFF1P04155 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TFF1P04155 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
TFF1P04155 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC19.09■□□□□ 0.65
TFF1P04155 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TFF1P04155 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
TFF1P04155 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TFF1P04155 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
TFF1P04155 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC19.08■□□□□ 0.65
TFF1P04155 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
TFF1P04155 HES6-204ENST00000409182 863 ntTSL 2 BASIC19.08■□□□□ 0.64
TFF1P04155 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC19.08■□□□□ 0.64
TFF1P04155 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
TFF1P04155 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
TFF1P04155 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
TFF1P04155 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
TFF1P04155 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
TFF1P04155 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TFF1P04155 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
TFF1P04155 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TFF1P04155 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC19.07■□□□□ 0.64
TFF1P04155 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TFF1P04155 CLTA-206ENST00000466396 695 ntTSL 2 BASIC19.07■□□□□ 0.64
TFF1P04155 TRIR-205ENST00000592273 783 ntTSL 3 BASIC19.07■□□□□ 0.64
TFF1P04155 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
TFF1P04155 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
TFF1P04155 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TFF1P04155 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
TFF1P04155 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TFF1P04155 AL161729.1-201ENST00000604104 1402 ntBASIC19.07■□□□□ 0.64
TFF1P04155 USF2-207ENST00000595068 1612 ntTSL 5 BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms