Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC18.25■□□□□ 0.51
TCRBV4S1A1TA0A5B7 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TCRBV4S1A1TA0A5B7 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC18.25■□□□□ 0.51
TCRBV4S1A1TA0A5B7 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC18.25■□□□□ 0.51
TCRBV4S1A1TA0A5B7 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
TCRBV4S1A1TA0A5B7 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC18.25■□□□□ 0.51
TCRBV4S1A1TA0A5B7 AC010997.5-201ENST00000609182 354 ntBASIC18.25■□□□□ 0.51
TCRBV4S1A1TA0A5B7 SHD-204ENST00000599689 1729 ntTSL 5 BASIC18.25■□□□□ 0.51
TCRBV4S1A1TA0A5B7 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TCRBV4S1A1TA0A5B7 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TCRBV4S1A1TA0A5B7 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC18.24■□□□□ 0.51
TCRBV4S1A1TA0A5B7 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
TCRBV4S1A1TA0A5B7 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
TCRBV4S1A1TA0A5B7 DUSP8P5-201ENST00000422884 1815 ntBASIC18.24■□□□□ 0.51
TCRBV4S1A1TA0A5B7 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC18.24■□□□□ 0.51
TCRBV4S1A1TA0A5B7 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TCRBV4S1A1TA0A5B7 TK2-202ENST00000417693 1046 ntTSL 2 BASIC18.24■□□□□ 0.51
TCRBV4S1A1TA0A5B7 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC18.24■□□□□ 0.51
TCRBV4S1A1TA0A5B7 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
TCRBV4S1A1TA0A5B7 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
TCRBV4S1A1TA0A5B7 HLA-L-211ENST00000482052 1765 ntBASIC18.24■□□□□ 0.51
TCRBV4S1A1TA0A5B7 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC18.24■□□□□ 0.51
TCRBV4S1A1TA0A5B7 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
TCRBV4S1A1TA0A5B7 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TCRBV4S1A1TA0A5B7 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
TCRBV4S1A1TA0A5B7 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TCRBV4S1A1TA0A5B7 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TCRBV4S1A1TA0A5B7 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TCRBV4S1A1TA0A5B7 ABCB10P4-201ENST00000566803 2184 ntBASIC18.23■□□□□ 0.51
TCRBV4S1A1TA0A5B7 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TCRBV4S1A1TA0A5B7 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TCRBV4S1A1TA0A5B7 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TCRBV4S1A1TA0A5B7 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC18.23■□□□□ 0.51
TCRBV4S1A1TA0A5B7 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC18.23■□□□□ 0.51
TCRBV4S1A1TA0A5B7 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TCRBV4S1A1TA0A5B7 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TCRBV4S1A1TA0A5B7 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC18.23■□□□□ 0.51
TCRBV4S1A1TA0A5B7 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
TCRBV4S1A1TA0A5B7 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TCRBV4S1A1TA0A5B7 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
TCRBV4S1A1TA0A5B7 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
TCRBV4S1A1TA0A5B7 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC18.22■□□□□ 0.51
TCRBV4S1A1TA0A5B7 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TCRBV4S1A1TA0A5B7 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TCRBV4S1A1TA0A5B7 AC068473.5-201ENST00000616428 2072 ntBASIC18.22■□□□□ 0.51
TCRBV4S1A1TA0A5B7 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TCRBV4S1A1TA0A5B7 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TCRBV4S1A1TA0A5B7 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TCRBV4S1A1TA0A5B7 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TCRBV4S1A1TA0A5B7 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC18.21■□□□□ 0.51
TCRBV4S1A1TA0A5B7 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TCRBV4S1A1TA0A5B7 AC090877.2-201ENST00000558441 1738 ntBASIC18.21■□□□□ 0.51
TCRBV4S1A1TA0A5B7 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TCRBV4S1A1TA0A5B7 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
TCRBV4S1A1TA0A5B7 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TCRBV4S1A1TA0A5B7 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TCRBV4S1A1TA0A5B7 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC18.21■□□□□ 0.51
TCRBV4S1A1TA0A5B7 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC18.21■□□□□ 0.51
TCRBV4S1A1TA0A5B7 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
TCRBV4S1A1TA0A5B7 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TCRBV4S1A1TA0A5B7 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TCRBV4S1A1TA0A5B7 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TCRBV4S1A1TA0A5B7 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TCRBV4S1A1TA0A5B7 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
TCRBV4S1A1TA0A5B7 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC18.2■□□□□ 0.5
TCRBV4S1A1TA0A5B7 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC18.2■□□□□ 0.5
TCRBV4S1A1TA0A5B7 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
TCRBV4S1A1TA0A5B7 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TCRBV4S1A1TA0A5B7 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC18.2■□□□□ 0.5
TCRBV4S1A1TA0A5B7 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TCRBV4S1A1TA0A5B7 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TCRBV4S1A1TA0A5B7 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TCRBV4S1A1TA0A5B7 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TCRBV4S1A1TA0A5B7 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
TCRBV4S1A1TA0A5B7 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
TCRBV4S1A1TA0A5B7 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TCRBV4S1A1TA0A5B7 SENP5-202ENST00000419026 973 ntTSL 3 BASIC18.19■□□□□ 0.5
TCRBV4S1A1TA0A5B7 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC18.19■□□□□ 0.5
TCRBV4S1A1TA0A5B7 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
TCRBV4S1A1TA0A5B7 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TCRBV4S1A1TA0A5B7 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
TCRBV4S1A1TA0A5B7 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TCRBV4S1A1TA0A5B7 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TCRBV4S1A1TA0A5B7 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC18.18■□□□□ 0.5
TCRBV4S1A1TA0A5B7 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC18.18■□□□□ 0.5
TCRBV4S1A1TA0A5B7 CLTA-210ENST00000540080 989 ntTSL 2 BASIC18.18■□□□□ 0.5
TCRBV4S1A1TA0A5B7 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC18.18■□□□□ 0.5
TCRBV4S1A1TA0A5B7 SRR-208ENST00000576848 588 ntTSL 4 BASIC18.18■□□□□ 0.5
TCRBV4S1A1TA0A5B7 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC18.18■□□□□ 0.5
TCRBV4S1A1TA0A5B7 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC18.18■□□□□ 0.5
TCRBV4S1A1TA0A5B7 MIR6724-1-201ENST00000616420 92 ntBASIC18.18■□□□□ 0.5
TCRBV4S1A1TA0A5B7 MIR6724-2-201ENST00000616483 92 ntBASIC18.18■□□□□ 0.5
TCRBV4S1A1TA0A5B7 MIR6724-4-201ENST00000617390 92 ntBASIC18.18■□□□□ 0.5
TCRBV4S1A1TA0A5B7 MIR6724-3-201ENST00000622482 92 ntBASIC18.18■□□□□ 0.5
TCRBV4S1A1TA0A5B7 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TCRBV4S1A1TA0A5B7 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TCRBV4S1A1TA0A5B7 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TCRBV4S1A1TA0A5B7 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TCRBV4S1A1TA0A5B7 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TCRBV4S1A1TA0A5B7 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 644.4 ms