Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
POLR2J3Q9H1A7 AC129492.7-201ENST00000622992 756 ntBASIC21.08■□□□□ 0.97
POLR2J3Q9H1A7 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC21.08■□□□□ 0.97
POLR2J3Q9H1A7 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.96
POLR2J3Q9H1A7 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
POLR2J3Q9H1A7 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
POLR2J3Q9H1A7 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
POLR2J3Q9H1A7 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
POLR2J3Q9H1A7 AC019171.1-201ENST00000601251 1056 ntBASIC21.07■□□□□ 0.96
POLR2J3Q9H1A7 U85056.1-201ENST00000616429 682 ntBASIC21.07■□□□□ 0.96
POLR2J3Q9H1A7 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
POLR2J3Q9H1A7 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
POLR2J3Q9H1A7 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
POLR2J3Q9H1A7 AC022616.5-201ENST00000518796 181 ntBASIC21.06■□□□□ 0.96
POLR2J3Q9H1A7 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
POLR2J3Q9H1A7 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
POLR2J3Q9H1A7 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
POLR2J3Q9H1A7 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
POLR2J3Q9H1A7 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC21.06■□□□□ 0.96
POLR2J3Q9H1A7 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
POLR2J3Q9H1A7 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
POLR2J3Q9H1A7 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
POLR2J3Q9H1A7 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
POLR2J3Q9H1A7 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
POLR2J3Q9H1A7 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
POLR2J3Q9H1A7 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
POLR2J3Q9H1A7 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC21.05■□□□□ 0.96
POLR2J3Q9H1A7 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
POLR2J3Q9H1A7 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
POLR2J3Q9H1A7 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC21.04■□□□□ 0.96
POLR2J3Q9H1A7 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC21.04■□□□□ 0.96
POLR2J3Q9H1A7 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC21.04■□□□□ 0.96
POLR2J3Q9H1A7 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
POLR2J3Q9H1A7 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
POLR2J3Q9H1A7 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
POLR2J3Q9H1A7 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
POLR2J3Q9H1A7 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC21.04■□□□□ 0.96
POLR2J3Q9H1A7 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
POLR2J3Q9H1A7 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
POLR2J3Q9H1A7 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
POLR2J3Q9H1A7 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.03■□□□□ 0.96
POLR2J3Q9H1A7 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.03■□□□□ 0.96
POLR2J3Q9H1A7 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
POLR2J3Q9H1A7 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC21.03■□□□□ 0.96
POLR2J3Q9H1A7 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
POLR2J3Q9H1A7 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
POLR2J3Q9H1A7 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
POLR2J3Q9H1A7 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC21.03■□□□□ 0.96
POLR2J3Q9H1A7 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
POLR2J3Q9H1A7 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
POLR2J3Q9H1A7 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC21.03■□□□□ 0.96
POLR2J3Q9H1A7 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC21.03■□□□□ 0.96
POLR2J3Q9H1A7 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
POLR2J3Q9H1A7 AL022069.1-201ENST00000568025 1636 ntBASIC21.03■□□□□ 0.96
POLR2J3Q9H1A7 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
POLR2J3Q9H1A7 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
POLR2J3Q9H1A7 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC21.03■□□□□ 0.96
POLR2J3Q9H1A7 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
POLR2J3Q9H1A7 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
POLR2J3Q9H1A7 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
POLR2J3Q9H1A7 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
POLR2J3Q9H1A7 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
POLR2J3Q9H1A7 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
POLR2J3Q9H1A7 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
POLR2J3Q9H1A7 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC21.02■□□□□ 0.96
POLR2J3Q9H1A7 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC21.02■□□□□ 0.96
POLR2J3Q9H1A7 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC21.02■□□□□ 0.96
POLR2J3Q9H1A7 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC21.02■□□□□ 0.96
POLR2J3Q9H1A7 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
POLR2J3Q9H1A7 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
POLR2J3Q9H1A7 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
POLR2J3Q9H1A7 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
POLR2J3Q9H1A7 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
POLR2J3Q9H1A7 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC21.01■□□□□ 0.95
POLR2J3Q9H1A7 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
POLR2J3Q9H1A7 KRT18P60-201ENST00000312876 1297 ntBASIC21.01■□□□□ 0.95
POLR2J3Q9H1A7 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
POLR2J3Q9H1A7 MTX2-204ENST00000443241 799 ntTSL 3 BASIC21.01■□□□□ 0.95
POLR2J3Q9H1A7 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC21.01■□□□□ 0.95
POLR2J3Q9H1A7 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC21.01■□□□□ 0.95
POLR2J3Q9H1A7 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
POLR2J3Q9H1A7 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
POLR2J3Q9H1A7 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
POLR2J3Q9H1A7 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
POLR2J3Q9H1A7 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC21■□□□□ 0.95
POLR2J3Q9H1A7 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
POLR2J3Q9H1A7 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC21■□□□□ 0.95
POLR2J3Q9H1A7 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
POLR2J3Q9H1A7 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
POLR2J3Q9H1A7 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC21■□□□□ 0.95
POLR2J3Q9H1A7 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC21■□□□□ 0.95
POLR2J3Q9H1A7 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
POLR2J3Q9H1A7 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
POLR2J3Q9H1A7 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
POLR2J3Q9H1A7 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
POLR2J3Q9H1A7 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
POLR2J3Q9H1A7 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
POLR2J3Q9H1A7 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
POLR2J3Q9H1A7 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
POLR2J3Q9H1A7 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms