Protein–RNA interactions for Protein: Q99727

TIMP4, Metalloproteinase inhibitor 4, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4Q99727 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC21.03■□□□□ 0.96
TIMP4Q99727 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
TIMP4Q99727 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC21.03■□□□□ 0.96
TIMP4Q99727 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TIMP4Q99727 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TIMP4Q99727 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
TIMP4Q99727 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC21.02■□□□□ 0.96
TIMP4Q99727 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TIMP4Q99727 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC21.02■□□□□ 0.96
TIMP4Q99727 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
TIMP4Q99727 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
TIMP4Q99727 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC21.01■□□□□ 0.95
TIMP4Q99727 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TIMP4Q99727 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC21.01■□□□□ 0.95
TIMP4Q99727 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TIMP4Q99727 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC21.01■□□□□ 0.95
TIMP4Q99727 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TIMP4Q99727 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TIMP4Q99727 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
TIMP4Q99727 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC21■□□□□ 0.95
TIMP4Q99727 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC21■□□□□ 0.95
TIMP4Q99727 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC21■□□□□ 0.95
TIMP4Q99727 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TIMP4Q99727 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC21■□□□□ 0.95
TIMP4Q99727 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TIMP4Q99727 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TIMP4Q99727 AC068473.5-201ENST00000616428 2072 ntBASIC21■□□□□ 0.95
TIMP4Q99727 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TIMP4Q99727 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
TIMP4Q99727 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TIMP4Q99727 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TIMP4Q99727 AC141586.4-201ENST00000624558 1573 ntBASIC20.99■□□□□ 0.95
TIMP4Q99727 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC20.99■□□□□ 0.95
TIMP4Q99727 AC004812.2-201ENST00000611079 2094 ntBASIC20.99■□□□□ 0.95
TIMP4Q99727 AC012676.1-201ENST00000574705 1949 ntBASIC20.99■□□□□ 0.95
TIMP4Q99727 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC20.99■□□□□ 0.95
TIMP4Q99727 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TIMP4Q99727 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TIMP4Q99727 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TIMP4Q99727 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TIMP4Q99727 AC010997.5-201ENST00000609182 354 ntBASIC20.98■□□□□ 0.95
TIMP4Q99727 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC20.98■□□□□ 0.95
TIMP4Q99727 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.98■□□□□ 0.95
TIMP4Q99727 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC20.98■□□□□ 0.95
TIMP4Q99727 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
TIMP4Q99727 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
TIMP4Q99727 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TIMP4Q99727 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
TIMP4Q99727 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TIMP4Q99727 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
TIMP4Q99727 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC20.97■□□□□ 0.95
TIMP4Q99727 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC20.97■□□□□ 0.95
TIMP4Q99727 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC20.97■□□□□ 0.95
TIMP4Q99727 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC20.97■□□□□ 0.95
TIMP4Q99727 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TIMP4Q99727 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TIMP4Q99727 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TIMP4Q99727 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TIMP4Q99727 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC20.96■□□□□ 0.95
TIMP4Q99727 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC20.96■□□□□ 0.95
TIMP4Q99727 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC20.96■□□□□ 0.95
TIMP4Q99727 CLTA-210ENST00000540080 989 ntTSL 2 BASIC20.96■□□□□ 0.95
TIMP4Q99727 MTDHP2-201ENST00000601468 714 ntBASIC20.96■□□□□ 0.95
TIMP4Q99727 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
TIMP4Q99727 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
TIMP4Q99727 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC20.96■□□□□ 0.95
TIMP4Q99727 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
TIMP4Q99727 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
TIMP4Q99727 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC20.96■□□□□ 0.95
TIMP4Q99727 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.95■□□□□ 0.94
TIMP4Q99727 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TIMP4Q99727 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TIMP4Q99727 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
TIMP4Q99727 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.95■□□□□ 0.94
TIMP4Q99727 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
TIMP4Q99727 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TIMP4Q99727 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TIMP4Q99727 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC20.95■□□□□ 0.94
TIMP4Q99727 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC20.95■□□□□ 0.94
TIMP4Q99727 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TIMP4Q99727 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TIMP4Q99727 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TIMP4Q99727 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TIMP4Q99727 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TIMP4Q99727 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TIMP4Q99727 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.94■□□□□ 0.94
TIMP4Q99727 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TIMP4Q99727 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
TIMP4Q99727 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
TIMP4Q99727 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC20.94■□□□□ 0.94
TIMP4Q99727 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.94■□□□□ 0.94
TIMP4Q99727 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.94■□□□□ 0.94
TIMP4Q99727 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TIMP4Q99727 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
TIMP4Q99727 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
TIMP4Q99727 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.93■□□□□ 0.94
TIMP4Q99727 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
TIMP4Q99727 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TIMP4Q99727 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TIMP4Q99727 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms