Protein–RNA interactions for Protein: A6NM62

LRRC53, Leucine-rich repeat-containing protein 53, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC53A6NM62 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
LRRC53A6NM62 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC24.7■■□□□ 1.55
LRRC53A6NM62 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC24.7■■□□□ 1.55
LRRC53A6NM62 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
LRRC53A6NM62 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC24.7■■□□□ 1.54
LRRC53A6NM62 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC24.7■■□□□ 1.54
LRRC53A6NM62 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.54
LRRC53A6NM62 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC24.69■■□□□ 1.54
LRRC53A6NM62 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
LRRC53A6NM62 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC24.69■■□□□ 1.54
LRRC53A6NM62 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC24.69■■□□□ 1.54
LRRC53A6NM62 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
LRRC53A6NM62 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
LRRC53A6NM62 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC24.68■■□□□ 1.54
LRRC53A6NM62 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC24.68■■□□□ 1.54
LRRC53A6NM62 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC24.68■■□□□ 1.54
LRRC53A6NM62 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
LRRC53A6NM62 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
LRRC53A6NM62 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC24.68■■□□□ 1.54
LRRC53A6NM62 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC24.68■■□□□ 1.54
LRRC53A6NM62 AC011551.1-201ENST00000614101 683 ntBASIC24.68■■□□□ 1.54
LRRC53A6NM62 BRD4-212ENST00000630599 726 ntTSL 2 BASIC24.68■■□□□ 1.54
LRRC53A6NM62 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
LRRC53A6NM62 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC24.68■■□□□ 1.54
LRRC53A6NM62 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
LRRC53A6NM62 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
LRRC53A6NM62 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
LRRC53A6NM62 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
LRRC53A6NM62 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
LRRC53A6NM62 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
LRRC53A6NM62 AL022069.1-201ENST00000568025 1636 ntBASIC24.67■■□□□ 1.54
LRRC53A6NM62 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
LRRC53A6NM62 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC24.67■■□□□ 1.54
LRRC53A6NM62 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
LRRC53A6NM62 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
LRRC53A6NM62 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC24.66■■□□□ 1.54
LRRC53A6NM62 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
LRRC53A6NM62 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
LRRC53A6NM62 HYI-210ENST00000486909 905 ntTSL 5 BASIC24.66■■□□□ 1.54
LRRC53A6NM62 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC24.66■■□□□ 1.54
LRRC53A6NM62 DUX4L18-201ENST00000553347 1267 ntBASIC24.66■■□□□ 1.54
LRRC53A6NM62 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC24.66■■□□□ 1.54
LRRC53A6NM62 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
LRRC53A6NM62 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC24.65■■□□□ 1.54
LRRC53A6NM62 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
LRRC53A6NM62 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC24.65■■□□□ 1.54
LRRC53A6NM62 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
LRRC53A6NM62 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
LRRC53A6NM62 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC24.65■■□□□ 1.54
LRRC53A6NM62 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC24.65■■□□□ 1.54
LRRC53A6NM62 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
LRRC53A6NM62 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC24.65■■□□□ 1.54
LRRC53A6NM62 AC131274.2-201ENST00000580697 1507 ntBASIC24.65■■□□□ 1.54
LRRC53A6NM62 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
LRRC53A6NM62 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC24.65■■□□□ 1.54
LRRC53A6NM62 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
LRRC53A6NM62 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
LRRC53A6NM62 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC24.64■■□□□ 1.54
LRRC53A6NM62 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC24.64■■□□□ 1.54
LRRC53A6NM62 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.54
LRRC53A6NM62 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.54
LRRC53A6NM62 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC24.64■■□□□ 1.54
LRRC53A6NM62 ABHD17AP5-201ENST00000580133 923 ntBASIC24.64■■□□□ 1.54
LRRC53A6NM62 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC24.64■■□□□ 1.53
LRRC53A6NM62 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.53
LRRC53A6NM62 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC24.64■■□□□ 1.53
LRRC53A6NM62 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
LRRC53A6NM62 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
LRRC53A6NM62 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC24.63■■□□□ 1.53
LRRC53A6NM62 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
LRRC53A6NM62 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC24.63■■□□□ 1.53
LRRC53A6NM62 AC092068.2-201ENST00000590491 1708 ntBASIC24.63■■□□□ 1.53
LRRC53A6NM62 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC24.63■■□□□ 1.53
LRRC53A6NM62 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
LRRC53A6NM62 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
LRRC53A6NM62 NTF6A-201ENST00000591175 560 ntBASIC24.62■■□□□ 1.53
LRRC53A6NM62 AC019171.1-201ENST00000601251 1056 ntBASIC24.62■■□□□ 1.53
LRRC53A6NM62 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC24.62■■□□□ 1.53
LRRC53A6NM62 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
LRRC53A6NM62 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC24.62■■□□□ 1.53
LRRC53A6NM62 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC24.62■■□□□ 1.53
LRRC53A6NM62 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC24.62■■□□□ 1.53
LRRC53A6NM62 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC24.62■■□□□ 1.53
LRRC53A6NM62 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
LRRC53A6NM62 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC24.61■■□□□ 1.53
LRRC53A6NM62 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC24.61■■□□□ 1.53
LRRC53A6NM62 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC24.61■■□□□ 1.53
LRRC53A6NM62 AC139795.1-202ENST00000500444 432 ntBASIC24.61■■□□□ 1.53
LRRC53A6NM62 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC24.61■■□□□ 1.53
LRRC53A6NM62 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC24.61■■□□□ 1.53
LRRC53A6NM62 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
LRRC53A6NM62 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
LRRC53A6NM62 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
LRRC53A6NM62 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
LRRC53A6NM62 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC24.61■■□□□ 1.53
LRRC53A6NM62 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
LRRC53A6NM62 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
LRRC53A6NM62 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC24.6■■□□□ 1.53
LRRC53A6NM62 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC24.6■■□□□ 1.53
LRRC53A6NM62 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms