Protein–RNA interactions for Protein: A0A0B4J1U6

TRBV9, T-cell receptor beta variable 9 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV9A0A0B4J1U6 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRBV9A0A0B4J1U6 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC18.15■□□□□ 0.5
TRBV9A0A0B4J1U6 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC18.15■□□□□ 0.5
TRBV9A0A0B4J1U6 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
TRBV9A0A0B4J1U6 AC103834.1-201ENST00000520383 144 ntBASIC18.15■□□□□ 0.5
TRBV9A0A0B4J1U6 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRBV9A0A0B4J1U6 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TRBV9A0A0B4J1U6 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
TRBV9A0A0B4J1U6 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
TRBV9A0A0B4J1U6 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC18.14■□□□□ 0.49
TRBV9A0A0B4J1U6 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TRBV9A0A0B4J1U6 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
TRBV9A0A0B4J1U6 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
TRBV9A0A0B4J1U6 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC18.14■□□□□ 0.49
TRBV9A0A0B4J1U6 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TRBV9A0A0B4J1U6 AC120024.1-201ENST00000562672 995 ntBASIC18.14■□□□□ 0.49
TRBV9A0A0B4J1U6 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC18.14■□□□□ 0.49
TRBV9A0A0B4J1U6 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRBV9A0A0B4J1U6 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC18.14■□□□□ 0.49
TRBV9A0A0B4J1U6 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRBV9A0A0B4J1U6 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRBV9A0A0B4J1U6 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
TRBV9A0A0B4J1U6 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC18.13■□□□□ 0.49
TRBV9A0A0B4J1U6 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TRBV9A0A0B4J1U6 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRBV9A0A0B4J1U6 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TRBV9A0A0B4J1U6 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC18.13■□□□□ 0.49
TRBV9A0A0B4J1U6 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC18.13■□□□□ 0.49
TRBV9A0A0B4J1U6 GAK-223ENST00000628912 497 ntTSL 5 BASIC18.13■□□□□ 0.49
TRBV9A0A0B4J1U6 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRBV9A0A0B4J1U6 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TRBV9A0A0B4J1U6 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRBV9A0A0B4J1U6 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRBV9A0A0B4J1U6 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRBV9A0A0B4J1U6 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRBV9A0A0B4J1U6 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRBV9A0A0B4J1U6 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRBV9A0A0B4J1U6 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRBV9A0A0B4J1U6 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC18.12■□□□□ 0.49
TRBV9A0A0B4J1U6 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRBV9A0A0B4J1U6 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRBV9A0A0B4J1U6 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRBV9A0A0B4J1U6 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
TRBV9A0A0B4J1U6 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC18.11■□□□□ 0.49
TRBV9A0A0B4J1U6 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
TRBV9A0A0B4J1U6 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRBV9A0A0B4J1U6 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRBV9A0A0B4J1U6 YBX1P4-201ENST00000392794 808 ntBASIC18.11■□□□□ 0.49
TRBV9A0A0B4J1U6 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRBV9A0A0B4J1U6 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC18.11■□□□□ 0.49
TRBV9A0A0B4J1U6 THA1P-201ENST00000590384 1145 ntBASIC18.11■□□□□ 0.49
TRBV9A0A0B4J1U6 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC18.11■□□□□ 0.49
TRBV9A0A0B4J1U6 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRBV9A0A0B4J1U6 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC18.11■□□□□ 0.49
TRBV9A0A0B4J1U6 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRBV9A0A0B4J1U6 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRBV9A0A0B4J1U6 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRBV9A0A0B4J1U6 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRBV9A0A0B4J1U6 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRBV9A0A0B4J1U6 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TRBV9A0A0B4J1U6 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TRBV9A0A0B4J1U6 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC18.1■□□□□ 0.49
TRBV9A0A0B4J1U6 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TRBV9A0A0B4J1U6 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRBV9A0A0B4J1U6 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRBV9A0A0B4J1U6 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRBV9A0A0B4J1U6 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
TRBV9A0A0B4J1U6 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRBV9A0A0B4J1U6 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRBV9A0A0B4J1U6 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRBV9A0A0B4J1U6 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRBV9A0A0B4J1U6 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRBV9A0A0B4J1U6 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
TRBV9A0A0B4J1U6 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRBV9A0A0B4J1U6 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRBV9A0A0B4J1U6 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRBV9A0A0B4J1U6 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRBV9A0A0B4J1U6 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC18.09■□□□□ 0.49
TRBV9A0A0B4J1U6 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRBV9A0A0B4J1U6 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRBV9A0A0B4J1U6 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
TRBV9A0A0B4J1U6 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
TRBV9A0A0B4J1U6 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRBV9A0A0B4J1U6 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRBV9A0A0B4J1U6 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRBV9A0A0B4J1U6 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRBV9A0A0B4J1U6 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRBV9A0A0B4J1U6 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRBV9A0A0B4J1U6 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC18.08■□□□□ 0.49
TRBV9A0A0B4J1U6 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
TRBV9A0A0B4J1U6 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TRBV9A0A0B4J1U6 KRT8P33-201ENST00000508125 1423 ntBASIC18.08■□□□□ 0.49
TRBV9A0A0B4J1U6 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC18.08■□□□□ 0.49
TRBV9A0A0B4J1U6 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRBV9A0A0B4J1U6 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRBV9A0A0B4J1U6 AC103724.3-201ENST00000564481 992 ntBASIC18.08■□□□□ 0.48
TRBV9A0A0B4J1U6 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC18.08■□□□□ 0.48
TRBV9A0A0B4J1U6 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRBV9A0A0B4J1U6 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRBV9A0A0B4J1U6 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms