Protein–RNA interactions for Protein: Q9Y6A2

CYP46A1, Cholesterol 24-hydroxylase, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP46A1Q9Y6A2 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC27.28■■□□□ 1.96
CYP46A1Q9Y6A2 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC27.28■■□□□ 1.96
CYP46A1Q9Y6A2 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC27.28■■□□□ 1.96
CYP46A1Q9Y6A2 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC27.28■■□□□ 1.96
CYP46A1Q9Y6A2 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC27.28■■□□□ 1.96
CYP46A1Q9Y6A2 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC27.28■■□□□ 1.96
CYP46A1Q9Y6A2 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
CYP46A1Q9Y6A2 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
CYP46A1Q9Y6A2 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC27.28■■□□□ 1.96
CYP46A1Q9Y6A2 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC27.27■■□□□ 1.96
CYP46A1Q9Y6A2 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC27.27■■□□□ 1.96
CYP46A1Q9Y6A2 AC120024.1-201ENST00000562672 995 ntBASIC27.27■■□□□ 1.96
CYP46A1Q9Y6A2 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC27.27■■□□□ 1.96
CYP46A1Q9Y6A2 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
CYP46A1Q9Y6A2 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC27.27■■□□□ 1.96
CYP46A1Q9Y6A2 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
CYP46A1Q9Y6A2 AL022069.1-201ENST00000568025 1636 ntBASIC27.27■■□□□ 1.96
CYP46A1Q9Y6A2 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC27.26■■□□□ 1.95
CYP46A1Q9Y6A2 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC27.26■■□□□ 1.95
CYP46A1Q9Y6A2 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC27.26■■□□□ 1.95
CYP46A1Q9Y6A2 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
CYP46A1Q9Y6A2 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC27.26■■□□□ 1.95
CYP46A1Q9Y6A2 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
CYP46A1Q9Y6A2 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC27.26■■□□□ 1.95
CYP46A1Q9Y6A2 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
CYP46A1Q9Y6A2 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
CYP46A1Q9Y6A2 AL033527.3-201ENST00000566366 1196 ntBASIC27.25■■□□□ 1.95
CYP46A1Q9Y6A2 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
CYP46A1Q9Y6A2 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC27.25■■□□□ 1.95
CYP46A1Q9Y6A2 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
CYP46A1Q9Y6A2 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC27.24■■□□□ 1.95
CYP46A1Q9Y6A2 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC27.24■■□□□ 1.95
CYP46A1Q9Y6A2 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
CYP46A1Q9Y6A2 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
CYP46A1Q9Y6A2 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
CYP46A1Q9Y6A2 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
CYP46A1Q9Y6A2 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC27.24■■□□□ 1.95
CYP46A1Q9Y6A2 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC27.23■■□□□ 1.95
CYP46A1Q9Y6A2 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC27.23■■□□□ 1.95
CYP46A1Q9Y6A2 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
CYP46A1Q9Y6A2 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC27.23■■□□□ 1.95
CYP46A1Q9Y6A2 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC27.23■■□□□ 1.95
CYP46A1Q9Y6A2 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC27.23■■□□□ 1.95
CYP46A1Q9Y6A2 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
CYP46A1Q9Y6A2 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
CYP46A1Q9Y6A2 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
CYP46A1Q9Y6A2 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
CYP46A1Q9Y6A2 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
CYP46A1Q9Y6A2 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
CYP46A1Q9Y6A2 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC27.22■■□□□ 1.95
CYP46A1Q9Y6A2 KRT18P24-201ENST00000344739 1156 ntBASIC27.22■■□□□ 1.95
CYP46A1Q9Y6A2 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC27.22■■□□□ 1.95
CYP46A1Q9Y6A2 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC27.22■■□□□ 1.95
CYP46A1Q9Y6A2 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC27.22■■□□□ 1.95
CYP46A1Q9Y6A2 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
CYP46A1Q9Y6A2 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC27.22■■□□□ 1.95
CYP46A1Q9Y6A2 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
CYP46A1Q9Y6A2 AC131274.2-201ENST00000580697 1507 ntBASIC27.21■■□□□ 1.95
CYP46A1Q9Y6A2 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC27.21■■□□□ 1.95
CYP46A1Q9Y6A2 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
CYP46A1Q9Y6A2 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC27.21■■□□□ 1.95
CYP46A1Q9Y6A2 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
CYP46A1Q9Y6A2 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC27.21■■□□□ 1.95
CYP46A1Q9Y6A2 EI24-213ENST00000618552 1747 ntTSL 5 BASIC27.21■■□□□ 1.95
CYP46A1Q9Y6A2 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
CYP46A1Q9Y6A2 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC27.21■■□□□ 1.95
CYP46A1Q9Y6A2 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC27.2■■□□□ 1.95
CYP46A1Q9Y6A2 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC27.2■■□□□ 1.95
CYP46A1Q9Y6A2 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
CYP46A1Q9Y6A2 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC27.2■■□□□ 1.94
CYP46A1Q9Y6A2 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC27.2■■□□□ 1.94
CYP46A1Q9Y6A2 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC27.2■■□□□ 1.94
CYP46A1Q9Y6A2 THA1P-201ENST00000590384 1145 ntBASIC27.2■■□□□ 1.94
CYP46A1Q9Y6A2 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC27.2■■□□□ 1.94
CYP46A1Q9Y6A2 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC27.2■■□□□ 1.94
CYP46A1Q9Y6A2 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC27.2■■□□□ 1.94
CYP46A1Q9Y6A2 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC27.2■■□□□ 1.94
CYP46A1Q9Y6A2 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC27.19■■□□□ 1.94
CYP46A1Q9Y6A2 LTK-203ENST00000453182 2412 ntTSL 2 BASIC27.19■■□□□ 1.94
CYP46A1Q9Y6A2 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
CYP46A1Q9Y6A2 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC27.19■■□□□ 1.94
CYP46A1Q9Y6A2 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC27.19■■□□□ 1.94
CYP46A1Q9Y6A2 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
CYP46A1Q9Y6A2 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC27.19■■□□□ 1.94
CYP46A1Q9Y6A2 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC27.18■■□□□ 1.94
CYP46A1Q9Y6A2 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
CYP46A1Q9Y6A2 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC27.18■■□□□ 1.94
CYP46A1Q9Y6A2 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
CYP46A1Q9Y6A2 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC27.18■■□□□ 1.94
CYP46A1Q9Y6A2 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC27.18■■□□□ 1.94
CYP46A1Q9Y6A2 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
CYP46A1Q9Y6A2 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC27.18■■□□□ 1.94
CYP46A1Q9Y6A2 DUSP8P5-201ENST00000422884 1815 ntBASIC27.18■■□□□ 1.94
CYP46A1Q9Y6A2 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
CYP46A1Q9Y6A2 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC27.18■■□□□ 1.94
CYP46A1Q9Y6A2 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
CYP46A1Q9Y6A2 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
CYP46A1Q9Y6A2 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC27.17■■□□□ 1.94
CYP46A1Q9Y6A2 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC27.17■■□□□ 1.94
CYP46A1Q9Y6A2 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms