Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
HPS4Q9NQG7 AC142381.2-201ENST00000566120 298 ntBASIC23.79■■□□□ 1.4
HPS4Q9NQG7 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC23.79■■□□□ 1.4
HPS4Q9NQG7 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC23.79■■□□□ 1.4
HPS4Q9NQG7 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
HPS4Q9NQG7 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC23.78■■□□□ 1.4
HPS4Q9NQG7 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
HPS4Q9NQG7 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
HPS4Q9NQG7 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC23.78■■□□□ 1.4
HPS4Q9NQG7 GUK1-205ENST00000366722 850 ntTSL 3 BASIC23.78■■□□□ 1.4
HPS4Q9NQG7 SUDS3P1-201ENST00000505831 966 ntBASIC23.78■■□□□ 1.4
HPS4Q9NQG7 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC23.78■■□□□ 1.4
HPS4Q9NQG7 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
HPS4Q9NQG7 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC23.78■■□□□ 1.4
HPS4Q9NQG7 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
HPS4Q9NQG7 AC131274.2-201ENST00000580697 1507 ntBASIC23.78■■□□□ 1.4
HPS4Q9NQG7 AC135279.3-201ENST00000610945 1311 ntBASIC23.78■■□□□ 1.4
HPS4Q9NQG7 AC005703.6-201ENST00000623265 1329 ntBASIC23.78■■□□□ 1.4
HPS4Q9NQG7 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
HPS4Q9NQG7 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
HPS4Q9NQG7 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
HPS4Q9NQG7 SLC6A10P-202ENST00000431994 2058 ntBASIC23.77■■□□□ 1.4
HPS4Q9NQG7 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
HPS4Q9NQG7 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
HPS4Q9NQG7 AC024257.2-201ENST00000549699 147 ntBASIC23.77■■□□□ 1.4
HPS4Q9NQG7 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC23.77■■□□□ 1.4
HPS4Q9NQG7 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
HPS4Q9NQG7 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC23.77■■□□□ 1.4
HPS4Q9NQG7 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
HPS4Q9NQG7 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
HPS4Q9NQG7 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
HPS4Q9NQG7 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
HPS4Q9NQG7 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
HPS4Q9NQG7 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC23.76■■□□□ 1.39
HPS4Q9NQG7 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC23.76■■□□□ 1.39
HPS4Q9NQG7 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
HPS4Q9NQG7 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC23.76■■□□□ 1.39
HPS4Q9NQG7 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
HPS4Q9NQG7 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC23.76■■□□□ 1.39
HPS4Q9NQG7 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
HPS4Q9NQG7 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
HPS4Q9NQG7 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC23.75■■□□□ 1.39
HPS4Q9NQG7 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC23.75■■□□□ 1.39
HPS4Q9NQG7 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
HPS4Q9NQG7 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
HPS4Q9NQG7 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC23.75■■□□□ 1.39
HPS4Q9NQG7 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
HPS4Q9NQG7 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC23.74■■□□□ 1.39
HPS4Q9NQG7 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
HPS4Q9NQG7 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC23.74■■□□□ 1.39
HPS4Q9NQG7 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC23.73■■□□□ 1.39
HPS4Q9NQG7 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
HPS4Q9NQG7 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
HPS4Q9NQG7 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
HPS4Q9NQG7 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
HPS4Q9NQG7 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
HPS4Q9NQG7 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
HPS4Q9NQG7 REST-206ENST00000612429 1376 ntTSL 5 BASIC23.73■■□□□ 1.39
HPS4Q9NQG7 REST-207ENST00000616975 1370 ntTSL 5 BASIC23.73■■□□□ 1.39
HPS4Q9NQG7 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC23.72■■□□□ 1.39
HPS4Q9NQG7 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC23.72■■□□□ 1.39
HPS4Q9NQG7 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
HPS4Q9NQG7 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC23.71■■□□□ 1.39
HPS4Q9NQG7 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC23.71■■□□□ 1.39
HPS4Q9NQG7 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
HPS4Q9NQG7 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
HPS4Q9NQG7 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
HPS4Q9NQG7 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
HPS4Q9NQG7 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC23.71■■□□□ 1.39
HPS4Q9NQG7 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
HPS4Q9NQG7 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
HPS4Q9NQG7 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC23.7■■□□□ 1.39
HPS4Q9NQG7 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
HPS4Q9NQG7 EDA-201ENST00000338901 1233 ntBASIC23.7■■□□□ 1.38
HPS4Q9NQG7 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
HPS4Q9NQG7 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
HPS4Q9NQG7 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
HPS4Q9NQG7 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
HPS4Q9NQG7 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC23.7■■□□□ 1.38
HPS4Q9NQG7 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
HPS4Q9NQG7 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.38
HPS4Q9NQG7 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
HPS4Q9NQG7 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
HPS4Q9NQG7 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
HPS4Q9NQG7 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
HPS4Q9NQG7 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
HPS4Q9NQG7 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
HPS4Q9NQG7 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
HPS4Q9NQG7 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
HPS4Q9NQG7 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC23.69■■□□□ 1.38
HPS4Q9NQG7 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC23.69■■□□□ 1.38
HPS4Q9NQG7 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
HPS4Q9NQG7 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
HPS4Q9NQG7 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC23.69■■□□□ 1.38
HPS4Q9NQG7 MIR6089-201ENST00000616698 64 ntBASIC23.69■■□□□ 1.38
HPS4Q9NQG7 AL355001.2-201ENST00000620617 1191 ntBASIC23.69■■□□□ 1.38
HPS4Q9NQG7 DUSP8P4-201ENST00000399538 1761 ntBASIC23.69■■□□□ 1.38
HPS4Q9NQG7 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
HPS4Q9NQG7 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC23.68■■□□□ 1.38
HPS4Q9NQG7 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC23.68■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 13.4 ms