Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TRIM2Q9C040 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC21.06■□□□□ 0.96
TRIM2Q9C040 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
TRIM2Q9C040 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
TRIM2Q9C040 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
TRIM2Q9C040 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TRIM2Q9C040 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
TRIM2Q9C040 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TRIM2Q9C040 CD37-213ENST00000598095 1598 ntTSL 2 BASIC21.06■□□□□ 0.96
TRIM2Q9C040 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
TRIM2Q9C040 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TRIM2Q9C040 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TRIM2Q9C040 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TRIM2Q9C040 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TRIM2Q9C040 IDNK-201ENST00000376417 511 ntTSL 5 BASIC21.05■□□□□ 0.96
TRIM2Q9C040 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TRIM2Q9C040 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TRIM2Q9C040 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC21.05■□□□□ 0.96
TRIM2Q9C040 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC21.05■□□□□ 0.96
TRIM2Q9C040 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRIM2Q9C040 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRIM2Q9C040 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRIM2Q9C040 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRIM2Q9C040 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC21.04■□□□□ 0.96
TRIM2Q9C040 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC21.04■□□□□ 0.96
TRIM2Q9C040 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC21.04■□□□□ 0.96
TRIM2Q9C040 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TRIM2Q9C040 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
TRIM2Q9C040 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRIM2Q9C040 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRIM2Q9C040 GAK-223ENST00000628912 497 ntTSL 5 BASIC21.03■□□□□ 0.96
TRIM2Q9C040 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC21.03■□□□□ 0.96
TRIM2Q9C040 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.03■□□□□ 0.96
TRIM2Q9C040 AL022069.1-201ENST00000568025 1636 ntBASIC21.03■□□□□ 0.96
TRIM2Q9C040 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRIM2Q9C040 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRIM2Q9C040 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TRIM2Q9C040 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TRIM2Q9C040 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
TRIM2Q9C040 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TRIM2Q9C040 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TRIM2Q9C040 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
TRIM2Q9C040 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC21.02■□□□□ 0.96
TRIM2Q9C040 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC21.02■□□□□ 0.96
TRIM2Q9C040 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC21.02■□□□□ 0.96
TRIM2Q9C040 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.02■□□□□ 0.96
TRIM2Q9C040 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
TRIM2Q9C040 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC21.02■□□□□ 0.96
TRIM2Q9C040 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC21.02■□□□□ 0.96
TRIM2Q9C040 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
TRIM2Q9C040 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
TRIM2Q9C040 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TRIM2Q9C040 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.95
TRIM2Q9C040 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TRIM2Q9C040 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRIM2Q9C040 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRIM2Q9C040 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
TRIM2Q9C040 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
TRIM2Q9C040 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC21.01■□□□□ 0.95
TRIM2Q9C040 AC010980.1-201ENST00000587192 1142 ntBASIC21.01■□□□□ 0.95
TRIM2Q9C040 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRIM2Q9C040 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRIM2Q9C040 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC21.01■□□□□ 0.95
TRIM2Q9C040 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC21■□□□□ 0.95
TRIM2Q9C040 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
TRIM2Q9C040 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
TRIM2Q9C040 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC21■□□□□ 0.95
TRIM2Q9C040 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TRIM2Q9C040 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TRIM2Q9C040 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
TRIM2Q9C040 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
TRIM2Q9C040 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21■□□□□ 0.95
TRIM2Q9C040 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC21■□□□□ 0.95
TRIM2Q9C040 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
TRIM2Q9C040 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC21■□□□□ 0.95
TRIM2Q9C040 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC21■□□□□ 0.95
TRIM2Q9C040 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC21■□□□□ 0.95
TRIM2Q9C040 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC21■□□□□ 0.95
TRIM2Q9C040 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
TRIM2Q9C040 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
TRIM2Q9C040 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM2Q9C040 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM2Q9C040 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM2Q9C040 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM2Q9C040 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM2Q9C040 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM2Q9C040 STK32C-205ENST00000456004 607 ntTSL 2 BASIC20.98■□□□□ 0.95
TRIM2Q9C040 AC120024.1-201ENST00000562672 995 ntBASIC20.98■□□□□ 0.95
TRIM2Q9C040 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC20.98■□□□□ 0.95
TRIM2Q9C040 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC20.98■□□□□ 0.95
TRIM2Q9C040 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM2Q9C040 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM2Q9C040 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM2Q9C040 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM2Q9C040 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM2Q9C040 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM2Q9C040 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
TRIM2Q9C040 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM2Q9C040 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM2Q9C040 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms