Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC35.4■■■■□ 3.26
CDC42BPAQ5VT25 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC35.4■■■■□ 3.26
CDC42BPAQ5VT25 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC35.4■■■■□ 3.26
CDC42BPAQ5VT25 AC027682.1-201ENST00000562846 899 ntBASIC35.4■■■■□ 3.26
CDC42BPAQ5VT25 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC35.39■■■■□ 3.26
CDC42BPAQ5VT25 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC35.39■■■■□ 3.26
CDC42BPAQ5VT25 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC35.39■■■■□ 3.26
CDC42BPAQ5VT25 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC35.39■■■■□ 3.26
CDC42BPAQ5VT25 HYI-206ENST00000372434 1025 ntTSL 5 BASIC35.39■■■■□ 3.26
CDC42BPAQ5VT25 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC35.39■■■■□ 3.26
CDC42BPAQ5VT25 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC35.39■■■■□ 3.26
CDC42BPAQ5VT25 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC35.39■■■■□ 3.26
CDC42BPAQ5VT25 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC35.38■■■■□ 3.25
CDC42BPAQ5VT25 STOX2-205ENST00000513034 807 ntTSL 3 BASIC35.38■■■■□ 3.25
CDC42BPAQ5VT25 CA15P2-201ENST00000611168 834 ntBASIC35.38■■■■□ 3.25
CDC42BPAQ5VT25 AC092666.2-201ENST00000613287 246 ntBASIC35.38■■■■□ 3.25
CDC42BPAQ5VT25 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC35.38■■■■□ 3.25
CDC42BPAQ5VT25 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC35.38■■■■□ 3.25
CDC42BPAQ5VT25 MIR6821-201ENST00000617625 74 ntBASIC35.37■■■■□ 3.25
CDC42BPAQ5VT25 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC35.37■■■■□ 3.25
CDC42BPAQ5VT25 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC35.37■■■■□ 3.25
CDC42BPAQ5VT25 SYT6-210ENST00000641643 1587 ntBASIC35.37■■■■□ 3.25
CDC42BPAQ5VT25 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC35.37■■■■□ 3.25
CDC42BPAQ5VT25 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC35.37■■■■□ 3.25
CDC42BPAQ5VT25 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC35.37■■■■□ 3.25
CDC42BPAQ5VT25 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC35.36■■■■□ 3.25
CDC42BPAQ5VT25 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC35.36■■■■□ 3.25
CDC42BPAQ5VT25 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC35.36■■■■□ 3.25
CDC42BPAQ5VT25 AC097381.1-201ENST00000429019 1296 ntBASIC35.36■■■■□ 3.25
CDC42BPAQ5VT25 AC099791.2-201ENST00000605725 427 ntBASIC35.36■■■■□ 3.25
CDC42BPAQ5VT25 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC35.36■■■■□ 3.25
CDC42BPAQ5VT25 RASA4CP-201ENST00000424092 1398 ntBASIC35.36■■■■□ 3.25
CDC42BPAQ5VT25 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC35.35■■■■□ 3.25
CDC42BPAQ5VT25 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC35.35■■■■□ 3.25
CDC42BPAQ5VT25 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC35.35■■■■□ 3.25
CDC42BPAQ5VT25 STK32C-205ENST00000456004 607 ntTSL 2 BASIC35.35■■■■□ 3.25
CDC42BPAQ5VT25 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC35.35■■■■□ 3.25
CDC42BPAQ5VT25 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC35.35■■■■□ 3.25
CDC42BPAQ5VT25 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC35.34■■■■□ 3.25
CDC42BPAQ5VT25 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC35.34■■■■□ 3.25
CDC42BPAQ5VT25 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC35.34■■■■□ 3.25
CDC42BPAQ5VT25 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC35.34■■■■□ 3.25
CDC42BPAQ5VT25 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC35.34■■■■□ 3.25
CDC42BPAQ5VT25 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC35.33■■■■□ 3.25
CDC42BPAQ5VT25 REST-206ENST00000612429 1376 ntTSL 5 BASIC35.33■■■■□ 3.25
CDC42BPAQ5VT25 REST-207ENST00000616975 1370 ntTSL 5 BASIC35.33■■■■□ 3.25
CDC42BPAQ5VT25 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC35.33■■■■□ 3.25
CDC42BPAQ5VT25 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC35.33■■■■□ 3.25
CDC42BPAQ5VT25 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC35.33■■■■□ 3.25
CDC42BPAQ5VT25 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC35.33■■■■□ 3.25
CDC42BPAQ5VT25 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC35.33■■■■□ 3.25
CDC42BPAQ5VT25 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC35.33■■■■□ 3.25
CDC42BPAQ5VT25 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC35.33■■■■□ 3.25
CDC42BPAQ5VT25 AC006455.2-201ENST00000429931 906 ntBASIC35.32■■■■□ 3.25
CDC42BPAQ5VT25 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC35.32■■■■□ 3.25
CDC42BPAQ5VT25 AC087623.3-201ENST00000607047 1098 ntBASIC35.32■■■■□ 3.25
CDC42BPAQ5VT25 ANKRD20A6P-201ENST00000618763 204 ntBASIC35.32■■■■□ 3.25
CDC42BPAQ5VT25 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC35.32■■■■□ 3.24
CDC42BPAQ5VT25 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC35.32■■■■□ 3.24
CDC42BPAQ5VT25 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC35.32■■■■□ 3.24
CDC42BPAQ5VT25 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC35.32■■■■□ 3.24
CDC42BPAQ5VT25 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC35.32■■■■□ 3.24
CDC42BPAQ5VT25 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC35.32■■■■□ 3.24
CDC42BPAQ5VT25 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC35.32■■■■□ 3.24
CDC42BPAQ5VT25 AC009102.2-201ENST00000606772 1639 ntBASIC35.31■■■■□ 3.24
CDC42BPAQ5VT25 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC35.31■■■■□ 3.24
CDC42BPAQ5VT25 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC35.31■■■■□ 3.24
CDC42BPAQ5VT25 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC35.31■■■■□ 3.24
CDC42BPAQ5VT25 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC35.31■■■■□ 3.24
CDC42BPAQ5VT25 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC35.31■■■■□ 3.24
CDC42BPAQ5VT25 SLC6A10P-202ENST00000431994 2058 ntBASIC35.3■■■■□ 3.24
CDC42BPAQ5VT25 PLD4-205ENST00000553861 667 ntTSL 2 BASIC35.3■■■■□ 3.24
CDC42BPAQ5VT25 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC35.3■■■■□ 3.24
CDC42BPAQ5VT25 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC35.3■■■■□ 3.24
CDC42BPAQ5VT25 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC35.3■■■■□ 3.24
CDC42BPAQ5VT25 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC35.29■■■■□ 3.24
CDC42BPAQ5VT25 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC35.29■■■■□ 3.24
CDC42BPAQ5VT25 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC35.29■■■■□ 3.24
CDC42BPAQ5VT25 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC35.29■■■■□ 3.24
CDC42BPAQ5VT25 AL121749.1-202ENST00000609313 2153 ntBASIC35.29■■■■□ 3.24
CDC42BPAQ5VT25 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC35.29■■■■□ 3.24
CDC42BPAQ5VT25 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC35.29■■■■□ 3.24
CDC42BPAQ5VT25 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC35.29■■■■□ 3.24
CDC42BPAQ5VT25 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC35.29■■■■□ 3.24
CDC42BPAQ5VT25 AL138724.1-201ENST00000606771 1088 ntBASIC35.29■■■■□ 3.24
CDC42BPAQ5VT25 AC099791.1-201ENST00000416440 715 ntBASIC35.28■■■■□ 3.24
CDC42BPAQ5VT25 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC35.28■■■■□ 3.24
CDC42BPAQ5VT25 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC35.28■■■■□ 3.24
CDC42BPAQ5VT25 RBM38-205ENST00000440234 686 ntTSL 2 BASIC35.27■■■■□ 3.24
CDC42BPAQ5VT25 AC136469.2-201ENST00000623944 1028 ntBASIC35.27■■■■□ 3.24
CDC42BPAQ5VT25 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC35.27■■■■□ 3.24
CDC42BPAQ5VT25 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC35.27■■■■□ 3.24
CDC42BPAQ5VT25 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC35.26■■■■□ 3.24
CDC42BPAQ5VT25 CD37-213ENST00000598095 1598 ntTSL 2 BASIC35.26■■■■□ 3.24
CDC42BPAQ5VT25 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC35.26■■■■□ 3.24
CDC42BPAQ5VT25 AC092171.4-201ENST00000609130 632 ntBASIC35.26■■■■□ 3.23
CDC42BPAQ5VT25 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC35.25■■■■□ 3.23
CDC42BPAQ5VT25 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC35.25■■■■□ 3.23
CDC42BPAQ5VT25 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC35.25■■■■□ 3.23
CDC42BPAQ5VT25 SNX3-202ENST00000349379 890 ntTSL 2 BASIC35.25■■■■□ 3.23
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms