Protein–RNA interactions for Protein: Q3ZAQ7

VMA21, Vacuolar ATPase assembly integral membrane protein VMA21, humanhuman

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21Q3ZAQ7 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC18.51■□□□□ 0.55
VMA21Q3ZAQ7 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
VMA21Q3ZAQ7 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC18.51■□□□□ 0.55
VMA21Q3ZAQ7 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
VMA21Q3ZAQ7 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
VMA21Q3ZAQ7 ABCB10P4-201ENST00000566803 2184 ntBASIC18.5■□□□□ 0.55
VMA21Q3ZAQ7 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
VMA21Q3ZAQ7 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
VMA21Q3ZAQ7 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC18.5■□□□□ 0.55
VMA21Q3ZAQ7 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
VMA21Q3ZAQ7 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC18.5■□□□□ 0.55
VMA21Q3ZAQ7 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
VMA21Q3ZAQ7 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
VMA21Q3ZAQ7 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
VMA21Q3ZAQ7 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
VMA21Q3ZAQ7 RARA-203ENST00000394086 2008 ntTSL 2 BASIC18.49■□□□□ 0.55
VMA21Q3ZAQ7 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
VMA21Q3ZAQ7 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC18.49■□□□□ 0.55
VMA21Q3ZAQ7 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
VMA21Q3ZAQ7 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
VMA21Q3ZAQ7 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
VMA21Q3ZAQ7 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
VMA21Q3ZAQ7 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC18.48■□□□□ 0.55
VMA21Q3ZAQ7 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC18.48■□□□□ 0.55
VMA21Q3ZAQ7 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC18.48■□□□□ 0.55
VMA21Q3ZAQ7 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
VMA21Q3ZAQ7 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
VMA21Q3ZAQ7 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC18.48■□□□□ 0.55
VMA21Q3ZAQ7 AC012354.3-201ENST00000623734 483 ntBASIC18.48■□□□□ 0.55
VMA21Q3ZAQ7 GAK-223ENST00000628912 497 ntTSL 5 BASIC18.48■□□□□ 0.55
VMA21Q3ZAQ7 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
VMA21Q3ZAQ7 AL022069.1-201ENST00000568025 1636 ntBASIC18.48■□□□□ 0.55
VMA21Q3ZAQ7 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
VMA21Q3ZAQ7 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC18.47■□□□□ 0.55
VMA21Q3ZAQ7 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
VMA21Q3ZAQ7 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
VMA21Q3ZAQ7 IDNK-201ENST00000376417 511 ntTSL 5 BASIC18.47■□□□□ 0.55
VMA21Q3ZAQ7 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
VMA21Q3ZAQ7 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
VMA21Q3ZAQ7 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
VMA21Q3ZAQ7 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC18.47■□□□□ 0.55
VMA21Q3ZAQ7 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC18.47■□□□□ 0.55
VMA21Q3ZAQ7 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
VMA21Q3ZAQ7 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
VMA21Q3ZAQ7 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
VMA21Q3ZAQ7 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
VMA21Q3ZAQ7 CD37-213ENST00000598095 1598 ntTSL 2 BASIC18.47■□□□□ 0.55
VMA21Q3ZAQ7 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
VMA21Q3ZAQ7 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC18.46■□□□□ 0.55
VMA21Q3ZAQ7 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
VMA21Q3ZAQ7 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC18.46■□□□□ 0.55
VMA21Q3ZAQ7 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC18.46■□□□□ 0.55
VMA21Q3ZAQ7 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
VMA21Q3ZAQ7 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
VMA21Q3ZAQ7 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC18.46■□□□□ 0.55
VMA21Q3ZAQ7 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
VMA21Q3ZAQ7 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC18.46■□□□□ 0.55
VMA21Q3ZAQ7 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
VMA21Q3ZAQ7 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
VMA21Q3ZAQ7 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.54
VMA21Q3ZAQ7 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
VMA21Q3ZAQ7 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
VMA21Q3ZAQ7 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
VMA21Q3ZAQ7 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC18.45■□□□□ 0.54
VMA21Q3ZAQ7 STK32C-205ENST00000456004 607 ntTSL 2 BASIC18.45■□□□□ 0.54
VMA21Q3ZAQ7 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
VMA21Q3ZAQ7 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
VMA21Q3ZAQ7 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
VMA21Q3ZAQ7 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC18.45■□□□□ 0.54
VMA21Q3ZAQ7 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC18.45■□□□□ 0.54
VMA21Q3ZAQ7 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
VMA21Q3ZAQ7 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
VMA21Q3ZAQ7 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
VMA21Q3ZAQ7 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
VMA21Q3ZAQ7 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
VMA21Q3ZAQ7 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
VMA21Q3ZAQ7 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
VMA21Q3ZAQ7 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC18.44■□□□□ 0.54
VMA21Q3ZAQ7 GUK1-208ENST00000366728 842 ntTSL 2 BASIC18.44■□□□□ 0.54
VMA21Q3ZAQ7 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC18.44■□□□□ 0.54
VMA21Q3ZAQ7 THA1P-201ENST00000590384 1145 ntBASIC18.44■□□□□ 0.54
VMA21Q3ZAQ7 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
VMA21Q3ZAQ7 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC18.44■□□□□ 0.54
VMA21Q3ZAQ7 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC18.43■□□□□ 0.54
VMA21Q3ZAQ7 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC18.43■□□□□ 0.54
VMA21Q3ZAQ7 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
VMA21Q3ZAQ7 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
VMA21Q3ZAQ7 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
VMA21Q3ZAQ7 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
VMA21Q3ZAQ7 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC18.43■□□□□ 0.54
VMA21Q3ZAQ7 AC120024.1-201ENST00000562672 995 ntBASIC18.43■□□□□ 0.54
VMA21Q3ZAQ7 AC010980.1-201ENST00000587192 1142 ntBASIC18.43■□□□□ 0.54
VMA21Q3ZAQ7 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
VMA21Q3ZAQ7 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
VMA21Q3ZAQ7 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
VMA21Q3ZAQ7 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC18.42■□□□□ 0.54
VMA21Q3ZAQ7 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC18.42■□□□□ 0.54
VMA21Q3ZAQ7 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
VMA21Q3ZAQ7 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC18.42■□□□□ 0.54
VMA21Q3ZAQ7 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms