Protein–RNA interactions for Protein: P51608

MECP2, Methyl-CpG-binding protein 2, humanhuman

Known RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2P51608 C1orf229-201ENST00000623686 2258 ntBASIC19.54■□□□□ 0.72
MECP2P51608 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
MECP2P51608 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.54■□□□□ 0.72
MECP2P51608 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.54■□□□□ 0.72
MECP2P51608 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC19.54■□□□□ 0.72
MECP2P51608 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
MECP2P51608 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
MECP2P51608 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
MECP2P51608 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC19.53■□□□□ 0.72
MECP2P51608 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
MECP2P51608 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
MECP2P51608 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC19.53■□□□□ 0.72
MECP2P51608 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
MECP2P51608 DUX4L13-201ENST00000554103 1267 ntBASIC19.53■□□□□ 0.72
MECP2P51608 DUX4L15-201ENST00000611059 1267 ntBASIC19.53■□□□□ 0.72
MECP2P51608 DUX4L23-201ENST00000615195 1269 ntBASIC19.53■□□□□ 0.72
MECP2P51608 DUX4L24-201ENST00000617576 1269 ntBASIC19.53■□□□□ 0.72
MECP2P51608 DUX4L22-201ENST00000618238 1269 ntBASIC19.53■□□□□ 0.72
MECP2P51608 DUX4L20-201ENST00000619712 1269 ntBASIC19.53■□□□□ 0.72
MECP2P51608 DUX4L21-201ENST00000622058 1269 ntBASIC19.53■□□□□ 0.72
MECP2P51608 DUX4L10-201ENST00000622460 1267 ntBASIC19.53■□□□□ 0.72
MECP2P51608 DUX4L25-201ENST00000624915 1269 ntBASIC19.53■□□□□ 0.72
MECP2P51608 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
MECP2P51608 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
MECP2P51608 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
MECP2P51608 GUSBP5-202ENST00000510805 1989 ntBASIC19.53■□□□□ 0.72
MECP2P51608 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
MECP2P51608 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
MECP2P51608 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
MECP2P51608 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
MECP2P51608 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
MECP2P51608 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
MECP2P51608 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
MECP2P51608 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
MECP2P51608 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
MECP2P51608 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.52■□□□□ 0.72
MECP2P51608 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
MECP2P51608 AGPS-202ENST00000409888 815 ntTSL 4 BASIC19.52■□□□□ 0.72
MECP2P51608 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC19.52■□□□□ 0.72
MECP2P51608 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC19.52■□□□□ 0.72
MECP2P51608 AC008813.1-201ENST00000536597 885 ntBASIC19.52■□□□□ 0.72
MECP2P51608 RNF166-209ENST00000567844 633 ntTSL 5 BASIC19.52■□□□□ 0.72
MECP2P51608 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.52■□□□□ 0.72
MECP2P51608 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.52■□□□□ 0.72
MECP2P51608 HLA-L-211ENST00000482052 1765 ntBASIC19.52■□□□□ 0.71
MECP2P51608 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
MECP2P51608 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
MECP2P51608 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
MECP2P51608 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
MECP2P51608 MIR3648-2-201ENST00000581792 180 ntBASIC19.51■□□□□ 0.71
MECP2P51608 MIR3648-1-201ENST00000615959 180 ntBASIC19.51■□□□□ 0.71
MECP2P51608 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
MECP2P51608 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.51■□□□□ 0.71
MECP2P51608 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
MECP2P51608 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
MECP2P51608 DUSP8P3-201ENST00000399571 1760 ntBASIC19.5■□□□□ 0.71
MECP2P51608 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC19.5■□□□□ 0.71
MECP2P51608 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
MECP2P51608 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
MECP2P51608 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
MECP2P51608 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
MECP2P51608 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
MECP2P51608 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
MECP2P51608 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
MECP2P51608 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC19.5■□□□□ 0.71
MECP2P51608 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
MECP2P51608 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
MECP2P51608 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
MECP2P51608 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
MECP2P51608 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
MECP2P51608 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
MECP2P51608 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
MECP2P51608 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
MECP2P51608 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
MECP2P51608 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.49■□□□□ 0.71
MECP2P51608 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.49■□□□□ 0.71
MECP2P51608 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
MECP2P51608 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
MECP2P51608 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
MECP2P51608 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC19.48■□□□□ 0.71
MECP2P51608 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
MECP2P51608 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
MECP2P51608 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
MECP2P51608 GDI1-215ENST00000630693 786 ntTSL 4 BASIC19.48■□□□□ 0.71
MECP2P51608 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
MECP2P51608 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
MECP2P51608 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.48■□□□□ 0.71
MECP2P51608 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
MECP2P51608 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
MECP2P51608 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC19.47■□□□□ 0.71
MECP2P51608 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
MECP2P51608 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
MECP2P51608 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.47■□□□□ 0.71
MECP2P51608 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
MECP2P51608 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC19.47■□□□□ 0.71
MECP2P51608 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.47■□□□□ 0.71
MECP2P51608 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
MECP2P51608 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
MECP2P51608 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
MECP2P51608 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms