Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC19.81■□□□□ 0.76
SFTPBP07988 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC19.81■□□□□ 0.76
SFTPBP07988 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SFTPBP07988 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SFTPBP07988 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SFTPBP07988 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SFTPBP07988 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC19.81■□□□□ 0.76
SFTPBP07988 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SFTPBP07988 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SFTPBP07988 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
SFTPBP07988 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SFTPBP07988 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC19.8■□□□□ 0.76
SFTPBP07988 IDNK-203ENST00000405990 629 ntTSL 2 BASIC19.8■□□□□ 0.76
SFTPBP07988 RPS2P7-201ENST00000447334 885 ntBASIC19.8■□□□□ 0.76
SFTPBP07988 HYI-210ENST00000486909 905 ntTSL 5 BASIC19.8■□□□□ 0.76
SFTPBP07988 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC19.8■□□□□ 0.76
SFTPBP07988 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
SFTPBP07988 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
SFTPBP07988 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SFTPBP07988 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SFTPBP07988 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SFTPBP07988 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SFTPBP07988 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SFTPBP07988 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC19.79■□□□□ 0.76
SFTPBP07988 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.79■□□□□ 0.76
SFTPBP07988 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SFTPBP07988 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SFTPBP07988 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SFTPBP07988 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
SFTPBP07988 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
SFTPBP07988 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SFTPBP07988 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SFTPBP07988 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SFTPBP07988 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SFTPBP07988 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
SFTPBP07988 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SFTPBP07988 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SFTPBP07988 ABCB10P4-201ENST00000566803 2184 ntBASIC19.77■□□□□ 0.76
SFTPBP07988 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
SFTPBP07988 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SFTPBP07988 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.77■□□□□ 0.76
SFTPBP07988 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SFTPBP07988 BEX3-202ENST00000372634 753 ntTSL 2 BASIC19.77■□□□□ 0.76
SFTPBP07988 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
SFTPBP07988 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC19.77■□□□□ 0.76
SFTPBP07988 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC19.77■□□□□ 0.76
SFTPBP07988 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
SFTPBP07988 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
SFTPBP07988 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
SFTPBP07988 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
SFTPBP07988 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
SFTPBP07988 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC19.77■□□□□ 0.75
SFTPBP07988 KRT8P33-201ENST00000508125 1423 ntBASIC19.76■□□□□ 0.75
SFTPBP07988 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SFTPBP07988 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SFTPBP07988 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SFTPBP07988 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SFTPBP07988 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SFTPBP07988 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC19.76■□□□□ 0.75
SFTPBP07988 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC19.76■□□□□ 0.75
SFTPBP07988 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SFTPBP07988 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC19.76■□□□□ 0.75
SFTPBP07988 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SFTPBP07988 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
SFTPBP07988 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC19.76■□□□□ 0.75
SFTPBP07988 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC19.75■□□□□ 0.75
SFTPBP07988 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
SFTPBP07988 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SFTPBP07988 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SFTPBP07988 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SFTPBP07988 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC19.75■□□□□ 0.75
SFTPBP07988 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC19.75■□□□□ 0.75
SFTPBP07988 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
SFTPBP07988 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC19.75■□□□□ 0.75
SFTPBP07988 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SFTPBP07988 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC19.75■□□□□ 0.75
SFTPBP07988 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC19.75■□□□□ 0.75
SFTPBP07988 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC19.75■□□□□ 0.75
SFTPBP07988 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SFTPBP07988 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SFTPBP07988 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SFTPBP07988 SHD-204ENST00000599689 1729 ntTSL 5 BASIC19.74■□□□□ 0.75
SFTPBP07988 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC19.74■□□□□ 0.75
SFTPBP07988 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC19.74■□□□□ 0.75
SFTPBP07988 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SFTPBP07988 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
SFTPBP07988 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC19.74■□□□□ 0.75
SFTPBP07988 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC19.74■□□□□ 0.75
SFTPBP07988 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SFTPBP07988 AC087393.1-201ENST00000582896 145 ntBASIC19.74■□□□□ 0.75
SFTPBP07988 PVT1_1.1-201ENST00000615125 194 ntBASIC19.74■□□□□ 0.75
SFTPBP07988 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SFTPBP07988 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SFTPBP07988 AC068473.5-201ENST00000616428 2072 ntBASIC19.74■□□□□ 0.75
SFTPBP07988 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SFTPBP07988 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SFTPBP07988 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
SFTPBP07988 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SFTPBP07988 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
SFTPBP07988 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms