Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
ZIC3O60481 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC20.82■□□□□ 0.92
ZIC3O60481 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
ZIC3O60481 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC20.82■□□□□ 0.92
ZIC3O60481 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ZIC3O60481 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.82■□□□□ 0.92
ZIC3O60481 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
ZIC3O60481 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ZIC3O60481 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC20.81■□□□□ 0.92
ZIC3O60481 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC20.81■□□□□ 0.92
ZIC3O60481 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.81■□□□□ 0.92
ZIC3O60481 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.81■□□□□ 0.92
ZIC3O60481 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ZIC3O60481 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ZIC3O60481 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC20.81■□□□□ 0.92
ZIC3O60481 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ZIC3O60481 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ZIC3O60481 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.81■□□□□ 0.92
ZIC3O60481 MIR6724-1-201ENST00000616420 92 ntBASIC20.81■□□□□ 0.92
ZIC3O60481 MIR6724-2-201ENST00000616483 92 ntBASIC20.81■□□□□ 0.92
ZIC3O60481 MIR6724-4-201ENST00000617390 92 ntBASIC20.81■□□□□ 0.92
ZIC3O60481 MIR6724-3-201ENST00000622482 92 ntBASIC20.81■□□□□ 0.92
ZIC3O60481 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ZIC3O60481 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.81■□□□□ 0.92
ZIC3O60481 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
ZIC3O60481 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
ZIC3O60481 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ZIC3O60481 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.8■□□□□ 0.92
ZIC3O60481 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC20.8■□□□□ 0.92
ZIC3O60481 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.8■□□□□ 0.92
ZIC3O60481 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ZIC3O60481 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
ZIC3O60481 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ZIC3O60481 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ZIC3O60481 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
ZIC3O60481 AL161729.1-201ENST00000604104 1402 ntBASIC20.79■□□□□ 0.92
ZIC3O60481 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
ZIC3O60481 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.79■□□□□ 0.92
ZIC3O60481 AC131212.1-201ENST00000613771 668 ntBASIC20.79■□□□□ 0.92
ZIC3O60481 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ZIC3O60481 AL139125.2-201ENST00000623134 1869 ntBASIC20.78■□□□□ 0.92
ZIC3O60481 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ZIC3O60481 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZIC3O60481 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZIC3O60481 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.78■□□□□ 0.92
ZIC3O60481 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC20.78■□□□□ 0.92
ZIC3O60481 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20.78■□□□□ 0.92
ZIC3O60481 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
ZIC3O60481 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
ZIC3O60481 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.77■□□□□ 0.92
ZIC3O60481 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ZIC3O60481 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC20.77■□□□□ 0.92
ZIC3O60481 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC20.77■□□□□ 0.92
ZIC3O60481 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC20.77■□□□□ 0.92
ZIC3O60481 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ZIC3O60481 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
ZIC3O60481 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC20.76■□□□□ 0.91
ZIC3O60481 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
ZIC3O60481 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ZIC3O60481 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ZIC3O60481 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ZIC3O60481 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
ZIC3O60481 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
ZIC3O60481 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.76■□□□□ 0.91
ZIC3O60481 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
ZIC3O60481 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.75■□□□□ 0.91
ZIC3O60481 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.75■□□□□ 0.91
ZIC3O60481 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ZIC3O60481 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ZIC3O60481 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ZIC3O60481 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
ZIC3O60481 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.74■□□□□ 0.91
ZIC3O60481 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.74■□□□□ 0.91
ZIC3O60481 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ZIC3O60481 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
ZIC3O60481 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ZIC3O60481 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.74■□□□□ 0.91
ZIC3O60481 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
ZIC3O60481 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC20.74■□□□□ 0.91
ZIC3O60481 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
ZIC3O60481 LINC01124-201ENST00000409786 2117 ntBASIC20.74■□□□□ 0.91
ZIC3O60481 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
ZIC3O60481 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ZIC3O60481 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ZIC3O60481 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ZIC3O60481 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC20.73■□□□□ 0.91
ZIC3O60481 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20.73■□□□□ 0.91
ZIC3O60481 MIR3621-201ENST00000580529 85 ntBASIC20.73■□□□□ 0.91
ZIC3O60481 AL117332.1-201ENST00000622628 974 ntBASIC20.73■□□□□ 0.91
ZIC3O60481 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
ZIC3O60481 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ZIC3O60481 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC20.73■□□□□ 0.91
ZIC3O60481 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ZIC3O60481 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.72■□□□□ 0.91
ZIC3O60481 LINC00543-201ENST00000567234 1845 ntBASIC20.72■□□□□ 0.91
ZIC3O60481 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.72■□□□□ 0.91
ZIC3O60481 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.72■□□□□ 0.91
ZIC3O60481 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ZIC3O60481 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ZIC3O60481 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms