Protein–RNA interactions for Protein: A0A0B4J277

TRAV22, T-cell receptor alpha variable 22 (Fragment), humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV22A0A0B4J277 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRAV22A0A0B4J277 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
TRAV22A0A0B4J277 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC13.05□□□□□ -0.32
TRAV22A0A0B4J277 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
TRAV22A0A0B4J277 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TRAV22A0A0B4J277 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRAV22A0A0B4J277 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRAV22A0A0B4J277 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRAV22A0A0B4J277 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRAV22A0A0B4J277 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRAV22A0A0B4J277 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRAV22A0A0B4J277 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRAV22A0A0B4J277 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRAV22A0A0B4J277 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TRAV22A0A0B4J277 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRAV22A0A0B4J277 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRAV22A0A0B4J277 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
TRAV22A0A0B4J277 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRAV22A0A0B4J277 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC13.04□□□□□ -0.32
TRAV22A0A0B4J277 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TRAV22A0A0B4J277 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC13.04□□□□□ -0.32
TRAV22A0A0B4J277 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRAV22A0A0B4J277 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC13.04□□□□□ -0.32
TRAV22A0A0B4J277 DENR-202ENST00000455982 1052 ntTSL 5 BASIC13.04□□□□□ -0.32
TRAV22A0A0B4J277 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRAV22A0A0B4J277 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRAV22A0A0B4J277 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRAV22A0A0B4J277 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRAV22A0A0B4J277 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC13.04□□□□□ -0.32
TRAV22A0A0B4J277 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC13.04□□□□□ -0.32
TRAV22A0A0B4J277 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRAV22A0A0B4J277 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
TRAV22A0A0B4J277 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
TRAV22A0A0B4J277 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
TRAV22A0A0B4J277 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRAV22A0A0B4J277 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRAV22A0A0B4J277 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRAV22A0A0B4J277 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TRAV22A0A0B4J277 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
TRAV22A0A0B4J277 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRAV22A0A0B4J277 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRAV22A0A0B4J277 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRAV22A0A0B4J277 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC13.03□□□□□ -0.32
TRAV22A0A0B4J277 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRAV22A0A0B4J277 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRAV22A0A0B4J277 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC13.03□□□□□ -0.32
TRAV22A0A0B4J277 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRAV22A0A0B4J277 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
TRAV22A0A0B4J277 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC13.03□□□□□ -0.32
TRAV22A0A0B4J277 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC13.03□□□□□ -0.32
TRAV22A0A0B4J277 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TRAV22A0A0B4J277 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TRAV22A0A0B4J277 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TRAV22A0A0B4J277 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC13.03□□□□□ -0.32
TRAV22A0A0B4J277 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRAV22A0A0B4J277 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
TRAV22A0A0B4J277 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
TRAV22A0A0B4J277 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
TRAV22A0A0B4J277 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
TRAV22A0A0B4J277 AL137060.1-201ENST00000618151 2648 ntBASIC13.02□□□□□ -0.32
TRAV22A0A0B4J277 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
TRAV22A0A0B4J277 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
TRAV22A0A0B4J277 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRAV22A0A0B4J277 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
TRAV22A0A0B4J277 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC13.02□□□□□ -0.33
TRAV22A0A0B4J277 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC13.02□□□□□ -0.33
TRAV22A0A0B4J277 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC13.02□□□□□ -0.33
TRAV22A0A0B4J277 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TRAV22A0A0B4J277 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRAV22A0A0B4J277 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRAV22A0A0B4J277 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC13.01□□□□□ -0.33
TRAV22A0A0B4J277 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC13.01□□□□□ -0.33
TRAV22A0A0B4J277 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
TRAV22A0A0B4J277 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
TRAV22A0A0B4J277 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRAV22A0A0B4J277 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC13.01□□□□□ -0.33
TRAV22A0A0B4J277 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRAV22A0A0B4J277 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRAV22A0A0B4J277 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
TRAV22A0A0B4J277 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TRAV22A0A0B4J277 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
TRAV22A0A0B4J277 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC13□□□□□ -0.33
TRAV22A0A0B4J277 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TRAV22A0A0B4J277 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC13□□□□□ -0.33
TRAV22A0A0B4J277 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC13□□□□□ -0.33
TRAV22A0A0B4J277 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
TRAV22A0A0B4J277 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
TRAV22A0A0B4J277 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC13□□□□□ -0.33
TRAV22A0A0B4J277 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
TRAV22A0A0B4J277 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TRAV22A0A0B4J277 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TRAV22A0A0B4J277 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TRAV22A0A0B4J277 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
TRAV22A0A0B4J277 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC13□□□□□ -0.33
TRAV22A0A0B4J277 SLC6A10P-202ENST00000431994 2058 ntBASIC13□□□□□ -0.33
TRAV22A0A0B4J277 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC13□□□□□ -0.33
TRAV22A0A0B4J277 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC12.99□□□□□ -0.33
TRAV22A0A0B4J277 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRAV22A0A0B4J277 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRAV22A0A0B4J277 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms