Protein–RNA interactions for Protein: Q9Y5I0

PCDHA13, Protocadherin alpha-13, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13Q9Y5I0 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
PCDHA13Q9Y5I0 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
PCDHA13Q9Y5I0 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
PCDHA13Q9Y5I0 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC24.7■■□□□ 1.54
PCDHA13Q9Y5I0 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC24.7■■□□□ 1.54
PCDHA13Q9Y5I0 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC24.7■■□□□ 1.54
PCDHA13Q9Y5I0 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
PCDHA13Q9Y5I0 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC24.69■■□□□ 1.54
PCDHA13Q9Y5I0 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC24.69■■□□□ 1.54
PCDHA13Q9Y5I0 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC24.69■■□□□ 1.54
PCDHA13Q9Y5I0 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC24.69■■□□□ 1.54
PCDHA13Q9Y5I0 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
PCDHA13Q9Y5I0 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC24.69■■□□□ 1.54
PCDHA13Q9Y5I0 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC24.69■■□□□ 1.54
PCDHA13Q9Y5I0 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
PCDHA13Q9Y5I0 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC24.68■■□□□ 1.54
PCDHA13Q9Y5I0 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
PCDHA13Q9Y5I0 AC009831.1-201ENST00000580420 1582 ntBASIC24.68■■□□□ 1.54
PCDHA13Q9Y5I0 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC24.68■■□□□ 1.54
PCDHA13Q9Y5I0 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC24.68■■□□□ 1.54
PCDHA13Q9Y5I0 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
PCDHA13Q9Y5I0 HES4-204ENST00000484667 667 ntTSL 3 BASIC24.68■■□□□ 1.54
PCDHA13Q9Y5I0 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
PCDHA13Q9Y5I0 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC24.68■■□□□ 1.54
PCDHA13Q9Y5I0 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
PCDHA13Q9Y5I0 AC079834.2-201ENST00000609776 1949 ntBASIC24.68■■□□□ 1.54
PCDHA13Q9Y5I0 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC24.68■■□□□ 1.54
PCDHA13Q9Y5I0 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
PCDHA13Q9Y5I0 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC24.67■■□□□ 1.54
PCDHA13Q9Y5I0 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC24.67■■□□□ 1.54
PCDHA13Q9Y5I0 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC24.67■■□□□ 1.54
PCDHA13Q9Y5I0 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
PCDHA13Q9Y5I0 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
PCDHA13Q9Y5I0 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
PCDHA13Q9Y5I0 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
PCDHA13Q9Y5I0 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
PCDHA13Q9Y5I0 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC24.66■■□□□ 1.54
PCDHA13Q9Y5I0 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC24.66■■□□□ 1.54
PCDHA13Q9Y5I0 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC24.66■■□□□ 1.54
PCDHA13Q9Y5I0 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC24.66■■□□□ 1.54
PCDHA13Q9Y5I0 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC24.66■■□□□ 1.54
PCDHA13Q9Y5I0 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
PCDHA13Q9Y5I0 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC24.66■■□□□ 1.54
PCDHA13Q9Y5I0 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
PCDHA13Q9Y5I0 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC24.66■■□□□ 1.54
PCDHA13Q9Y5I0 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC24.66■■□□□ 1.54
PCDHA13Q9Y5I0 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
PCDHA13Q9Y5I0 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
PCDHA13Q9Y5I0 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
PCDHA13Q9Y5I0 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
PCDHA13Q9Y5I0 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
PCDHA13Q9Y5I0 AC133552.2-201ENST00000619106 1032 ntBASIC24.65■■□□□ 1.54
PCDHA13Q9Y5I0 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
PCDHA13Q9Y5I0 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
PCDHA13Q9Y5I0 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
PCDHA13Q9Y5I0 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.54
PCDHA13Q9Y5I0 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
PCDHA13Q9Y5I0 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC24.64■■□□□ 1.54
PCDHA13Q9Y5I0 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
PCDHA13Q9Y5I0 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
PCDHA13Q9Y5I0 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
PCDHA13Q9Y5I0 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
PCDHA13Q9Y5I0 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC24.63■■□□□ 1.53
PCDHA13Q9Y5I0 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC24.63■■□□□ 1.53
PCDHA13Q9Y5I0 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC24.63■■□□□ 1.53
PCDHA13Q9Y5I0 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
PCDHA13Q9Y5I0 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC24.63■■□□□ 1.53
PCDHA13Q9Y5I0 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC24.63■■□□□ 1.53
PCDHA13Q9Y5I0 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
PCDHA13Q9Y5I0 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC24.63■■□□□ 1.53
PCDHA13Q9Y5I0 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC24.62■■□□□ 1.53
PCDHA13Q9Y5I0 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC24.62■■□□□ 1.53
PCDHA13Q9Y5I0 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
PCDHA13Q9Y5I0 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC24.62■■□□□ 1.53
PCDHA13Q9Y5I0 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC24.62■■□□□ 1.53
PCDHA13Q9Y5I0 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
PCDHA13Q9Y5I0 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
PCDHA13Q9Y5I0 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
PCDHA13Q9Y5I0 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
PCDHA13Q9Y5I0 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
PCDHA13Q9Y5I0 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
PCDHA13Q9Y5I0 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC24.62■■□□□ 1.53
PCDHA13Q9Y5I0 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC24.61■■□□□ 1.53
PCDHA13Q9Y5I0 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC24.61■■□□□ 1.53
PCDHA13Q9Y5I0 MIR4449-201ENST00000578365 66 ntBASIC24.61■■□□□ 1.53
PCDHA13Q9Y5I0 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
PCDHA13Q9Y5I0 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
PCDHA13Q9Y5I0 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
PCDHA13Q9Y5I0 AC090877.2-201ENST00000558441 1738 ntBASIC24.61■■□□□ 1.53
PCDHA13Q9Y5I0 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
PCDHA13Q9Y5I0 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC24.6■■□□□ 1.53
PCDHA13Q9Y5I0 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC24.6■■□□□ 1.53
PCDHA13Q9Y5I0 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
PCDHA13Q9Y5I0 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC24.6■■□□□ 1.53
PCDHA13Q9Y5I0 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
PCDHA13Q9Y5I0 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC24.6■■□□□ 1.53
PCDHA13Q9Y5I0 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC24.6■■□□□ 1.53
PCDHA13Q9Y5I0 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC24.6■■□□□ 1.53
PCDHA13Q9Y5I0 RPS2P7-201ENST00000447334 885 ntBASIC24.6■■□□□ 1.53
PCDHA13Q9Y5I0 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC24.6■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms