Protein–RNA interactions for Protein: Q9Y5E3

PCDHB6, Protocadherin beta-6, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB6Q9Y5E3 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC26.38■■□□□ 1.81
PCDHB6Q9Y5E3 GAK-223ENST00000628912 497 ntTSL 5 BASIC26.38■■□□□ 1.81
PCDHB6Q9Y5E3 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC26.38■■□□□ 1.81
PCDHB6Q9Y5E3 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC26.38■■□□□ 1.81
PCDHB6Q9Y5E3 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
PCDHB6Q9Y5E3 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC26.37■■□□□ 1.81
PCDHB6Q9Y5E3 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC26.37■■□□□ 1.81
PCDHB6Q9Y5E3 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
PCDHB6Q9Y5E3 MIR4508-201ENST00000584178 70 ntBASIC26.37■■□□□ 1.81
PCDHB6Q9Y5E3 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
PCDHB6Q9Y5E3 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC26.37■■□□□ 1.81
PCDHB6Q9Y5E3 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
PCDHB6Q9Y5E3 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC26.36■■□□□ 1.81
PCDHB6Q9Y5E3 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
PCDHB6Q9Y5E3 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
PCDHB6Q9Y5E3 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC26.36■■□□□ 1.81
PCDHB6Q9Y5E3 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
PCDHB6Q9Y5E3 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC26.36■■□□□ 1.81
PCDHB6Q9Y5E3 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
PCDHB6Q9Y5E3 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
PCDHB6Q9Y5E3 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC26.35■■□□□ 1.81
PCDHB6Q9Y5E3 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC26.35■■□□□ 1.81
PCDHB6Q9Y5E3 KRT8P33-201ENST00000508125 1423 ntBASIC26.35■■□□□ 1.81
PCDHB6Q9Y5E3 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC26.35■■□□□ 1.81
PCDHB6Q9Y5E3 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC26.35■■□□□ 1.81
PCDHB6Q9Y5E3 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC26.35■■□□□ 1.81
PCDHB6Q9Y5E3 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
PCDHB6Q9Y5E3 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
PCDHB6Q9Y5E3 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
PCDHB6Q9Y5E3 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
PCDHB6Q9Y5E3 KRT18P24-201ENST00000344739 1156 ntBASIC26.34■■□□□ 1.81
PCDHB6Q9Y5E3 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC26.34■■□□□ 1.81
PCDHB6Q9Y5E3 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
PCDHB6Q9Y5E3 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC26.34■■□□□ 1.81
PCDHB6Q9Y5E3 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC26.34■■□□□ 1.81
PCDHB6Q9Y5E3 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
PCDHB6Q9Y5E3 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
PCDHB6Q9Y5E3 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC26.33■■□□□ 1.81
PCDHB6Q9Y5E3 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC26.33■■□□□ 1.81
PCDHB6Q9Y5E3 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC26.33■■□□□ 1.81
PCDHB6Q9Y5E3 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC26.33■■□□□ 1.81
PCDHB6Q9Y5E3 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC26.33■■□□□ 1.81
PCDHB6Q9Y5E3 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
PCDHB6Q9Y5E3 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
PCDHB6Q9Y5E3 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
PCDHB6Q9Y5E3 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
PCDHB6Q9Y5E3 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC26.32■■□□□ 1.8
PCDHB6Q9Y5E3 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC26.32■■□□□ 1.8
PCDHB6Q9Y5E3 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
PCDHB6Q9Y5E3 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC26.32■■□□□ 1.8
PCDHB6Q9Y5E3 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC26.31■■□□□ 1.8
PCDHB6Q9Y5E3 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
PCDHB6Q9Y5E3 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
PCDHB6Q9Y5E3 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
PCDHB6Q9Y5E3 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
PCDHB6Q9Y5E3 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
PCDHB6Q9Y5E3 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC26.31■■□□□ 1.8
PCDHB6Q9Y5E3 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
PCDHB6Q9Y5E3 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
PCDHB6Q9Y5E3 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
PCDHB6Q9Y5E3 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
PCDHB6Q9Y5E3 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC26.3■■□□□ 1.8
PCDHB6Q9Y5E3 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
PCDHB6Q9Y5E3 THA1P-201ENST00000590384 1145 ntBASIC26.3■■□□□ 1.8
PCDHB6Q9Y5E3 MIR4281-201ENST00000580852 62 ntBASIC26.29■■□□□ 1.8
PCDHB6Q9Y5E3 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC26.29■■□□□ 1.8
PCDHB6Q9Y5E3 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
PCDHB6Q9Y5E3 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
PCDHB6Q9Y5E3 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC26.28■■□□□ 1.8
PCDHB6Q9Y5E3 AC103724.3-201ENST00000564481 992 ntBASIC26.28■■□□□ 1.8
PCDHB6Q9Y5E3 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
PCDHB6Q9Y5E3 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
PCDHB6Q9Y5E3 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC26.28■■□□□ 1.8
PCDHB6Q9Y5E3 AF131216.4-201ENST00000638924 1588 ntBASIC26.28■■□□□ 1.8
PCDHB6Q9Y5E3 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC26.28■■□□□ 1.8
PCDHB6Q9Y5E3 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC26.27■■□□□ 1.8
PCDHB6Q9Y5E3 CD37-213ENST00000598095 1598 ntTSL 2 BASIC26.27■■□□□ 1.8
PCDHB6Q9Y5E3 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC26.27■■□□□ 1.8
PCDHB6Q9Y5E3 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
PCDHB6Q9Y5E3 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
PCDHB6Q9Y5E3 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC26.26■■□□□ 1.79
PCDHB6Q9Y5E3 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
PCDHB6Q9Y5E3 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
PCDHB6Q9Y5E3 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC26.26■■□□□ 1.79
PCDHB6Q9Y5E3 AC131274.2-201ENST00000580697 1507 ntBASIC26.26■■□□□ 1.79
PCDHB6Q9Y5E3 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
PCDHB6Q9Y5E3 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC26.26■■□□□ 1.79
PCDHB6Q9Y5E3 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
PCDHB6Q9Y5E3 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC26.25■■□□□ 1.79
PCDHB6Q9Y5E3 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
PCDHB6Q9Y5E3 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC26.25■■□□□ 1.79
PCDHB6Q9Y5E3 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
PCDHB6Q9Y5E3 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC26.25■■□□□ 1.79
PCDHB6Q9Y5E3 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC26.25■■□□□ 1.79
PCDHB6Q9Y5E3 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
PCDHB6Q9Y5E3 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC26.25■■□□□ 1.79
PCDHB6Q9Y5E3 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC26.24■■□□□ 1.79
PCDHB6Q9Y5E3 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
PCDHB6Q9Y5E3 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
PCDHB6Q9Y5E3 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC26.24■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms