Protein–RNA interactions for Protein: Q9UMD9

COL17A1, Collagen alpha-1(XVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1Q9UMD9 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC35.68■■■■□ 3.3
COL17A1Q9UMD9 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC35.68■■■■□ 3.3
COL17A1Q9UMD9 AC136469.2-201ENST00000623944 1028 ntBASIC35.68■■■■□ 3.3
COL17A1Q9UMD9 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC35.68■■■■□ 3.3
COL17A1Q9UMD9 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC35.68■■■■□ 3.3
COL17A1Q9UMD9 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC35.68■■■■□ 3.3
COL17A1Q9UMD9 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC35.68■■■■□ 3.3
COL17A1Q9UMD9 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC35.68■■■■□ 3.3
COL17A1Q9UMD9 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC35.67■■■■□ 3.3
COL17A1Q9UMD9 EMC9-206ENST00000560403 872 ntTSL 2 BASIC35.67■■■■□ 3.3
COL17A1Q9UMD9 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC35.67■■■■□ 3.3
COL17A1Q9UMD9 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC35.67■■■■□ 3.3
COL17A1Q9UMD9 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC35.67■■■■□ 3.3
COL17A1Q9UMD9 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC35.67■■■■□ 3.3
COL17A1Q9UMD9 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC35.67■■■■□ 3.3
COL17A1Q9UMD9 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC35.66■■■■□ 3.3
COL17A1Q9UMD9 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC35.66■■■■□ 3.3
COL17A1Q9UMD9 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC35.66■■■■□ 3.3
COL17A1Q9UMD9 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC35.66■■■■□ 3.3
COL17A1Q9UMD9 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC35.66■■■■□ 3.3
COL17A1Q9UMD9 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC35.66■■■■□ 3.3
COL17A1Q9UMD9 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC35.66■■■■□ 3.3
COL17A1Q9UMD9 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC35.65■■■■□ 3.3
COL17A1Q9UMD9 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC35.65■■■■□ 3.3
COL17A1Q9UMD9 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC35.65■■■■□ 3.3
COL17A1Q9UMD9 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC35.65■■■■□ 3.3
COL17A1Q9UMD9 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC35.65■■■■□ 3.3
COL17A1Q9UMD9 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC35.64■■■■□ 3.3
COL17A1Q9UMD9 AC233992.3-201ENST00000607491 485 ntBASIC35.64■■■■□ 3.3
COL17A1Q9UMD9 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC35.64■■■■□ 3.3
COL17A1Q9UMD9 AC142472.1-201ENST00000612013 1741 ntBASIC35.64■■■■□ 3.3
COL17A1Q9UMD9 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC35.63■■■■□ 3.29
COL17A1Q9UMD9 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC35.63■■■■□ 3.29
COL17A1Q9UMD9 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC35.63■■■■□ 3.29
COL17A1Q9UMD9 FOXO3B-201ENST00000395675 1928 ntBASIC35.63■■■■□ 3.29
COL17A1Q9UMD9 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC35.62■■■■□ 3.29
COL17A1Q9UMD9 AC027612.3-201ENST00000413684 1047 ntBASIC35.62■■■■□ 3.29
COL17A1Q9UMD9 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC35.62■■■■□ 3.29
COL17A1Q9UMD9 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC35.62■■■■□ 3.29
COL17A1Q9UMD9 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC35.61■■■■□ 3.29
COL17A1Q9UMD9 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC35.61■■■■□ 3.29
COL17A1Q9UMD9 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC35.61■■■■□ 3.29
COL17A1Q9UMD9 TK2-208ENST00000545043 1120 ntTSL 2 BASIC35.61■■■■□ 3.29
COL17A1Q9UMD9 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC35.61■■■■□ 3.29
COL17A1Q9UMD9 RAP2CP1-201ENST00000605103 478 ntBASIC35.61■■■■□ 3.29
COL17A1Q9UMD9 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC35.61■■■■□ 3.29
COL17A1Q9UMD9 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC35.6■■■■□ 3.29
COL17A1Q9UMD9 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC35.6■■■■□ 3.29
COL17A1Q9UMD9 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC35.6■■■■□ 3.29
COL17A1Q9UMD9 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC35.6■■■■□ 3.29
COL17A1Q9UMD9 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC35.6■■■■□ 3.29
COL17A1Q9UMD9 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC35.6■■■■□ 3.29
COL17A1Q9UMD9 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC35.6■■■■□ 3.29
COL17A1Q9UMD9 AC090877.2-201ENST00000558441 1738 ntBASIC35.59■■■■□ 3.29
COL17A1Q9UMD9 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC35.59■■■■□ 3.29
COL17A1Q9UMD9 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC35.59■■■■□ 3.29
COL17A1Q9UMD9 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC35.59■■■■□ 3.29
COL17A1Q9UMD9 BX842568.3-201ENST00000418104 571 ntBASIC35.59■■■■□ 3.29
COL17A1Q9UMD9 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC35.59■■■■□ 3.29
COL17A1Q9UMD9 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC35.58■■■■□ 3.29
COL17A1Q9UMD9 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC35.58■■■■□ 3.29
COL17A1Q9UMD9 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC35.58■■■■□ 3.29
COL17A1Q9UMD9 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC35.58■■■■□ 3.29
COL17A1Q9UMD9 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC35.58■■■■□ 3.29
COL17A1Q9UMD9 AC005703.6-201ENST00000623265 1329 ntBASIC35.58■■■■□ 3.29
COL17A1Q9UMD9 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC35.57■■■■□ 3.29
COL17A1Q9UMD9 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC35.57■■■■□ 3.29
COL17A1Q9UMD9 HES6-206ENST00000409574 738 ntTSL 2 BASIC35.57■■■■□ 3.28
COL17A1Q9UMD9 GRAMD4P2-201ENST00000423297 1097 ntBASIC35.57■■■■□ 3.28
COL17A1Q9UMD9 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC35.57■■■■□ 3.28
COL17A1Q9UMD9 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC35.57■■■■□ 3.28
COL17A1Q9UMD9 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC35.56■■■■□ 3.28
COL17A1Q9UMD9 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC35.56■■■■□ 3.28
COL17A1Q9UMD9 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC35.56■■■■□ 3.28
COL17A1Q9UMD9 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC35.56■■■■□ 3.28
COL17A1Q9UMD9 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC35.55■■■■□ 3.28
COL17A1Q9UMD9 AC123595.1-201ENST00000440769 1046 ntBASIC35.55■■■■□ 3.28
COL17A1Q9UMD9 AC066615.1-201ENST00000640911 628 ntBASIC35.55■■■■□ 3.28
COL17A1Q9UMD9 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC35.55■■■■□ 3.28
COL17A1Q9UMD9 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC35.55■■■■□ 3.28
COL17A1Q9UMD9 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC35.55■■■■□ 3.28
COL17A1Q9UMD9 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC35.55■■■■□ 3.28
COL17A1Q9UMD9 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC35.54■■■■□ 3.28
COL17A1Q9UMD9 SNX3-202ENST00000349379 890 ntTSL 2 BASIC35.54■■■■□ 3.28
COL17A1Q9UMD9 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC35.54■■■■□ 3.28
COL17A1Q9UMD9 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC35.54■■■■□ 3.28
COL17A1Q9UMD9 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC35.54■■■■□ 3.28
COL17A1Q9UMD9 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC35.54■■■■□ 3.28
COL17A1Q9UMD9 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC35.53■■■■□ 3.28
COL17A1Q9UMD9 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC35.53■■■■□ 3.28
COL17A1Q9UMD9 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC35.52■■■■□ 3.28
COL17A1Q9UMD9 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC35.52■■■■□ 3.28
COL17A1Q9UMD9 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC35.52■■■■□ 3.28
COL17A1Q9UMD9 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC35.52■■■■□ 3.28
COL17A1Q9UMD9 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC35.52■■■■□ 3.28
COL17A1Q9UMD9 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC35.52■■■■□ 3.28
COL17A1Q9UMD9 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC35.52■■■■□ 3.28
COL17A1Q9UMD9 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC35.52■■■■□ 3.28
COL17A1Q9UMD9 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC35.52■■■■□ 3.28
COL17A1Q9UMD9 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC35.52■■■■□ 3.28
Retrieved 100 of 98,524 protein–RNA pairs in 9.9 ms