Protein–RNA interactions for Protein: Q96B54

ZNF428, Zinc finger protein 428, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF428Q96B54 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
ZNF428Q96B54 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
ZNF428Q96B54 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
ZNF428Q96B54 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC29.86■■■□□ 2.37
ZNF428Q96B54 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
ZNF428Q96B54 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC29.86■■■□□ 2.37
ZNF428Q96B54 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
ZNF428Q96B54 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC29.85■■■□□ 2.37
ZNF428Q96B54 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC29.85■■■□□ 2.37
ZNF428Q96B54 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC29.85■■■□□ 2.37
ZNF428Q96B54 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC29.85■■■□□ 2.37
ZNF428Q96B54 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
ZNF428Q96B54 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC29.84■■■□□ 2.37
ZNF428Q96B54 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
ZNF428Q96B54 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC29.84■■■□□ 2.37
ZNF428Q96B54 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC29.84■■■□□ 2.37
ZNF428Q96B54 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC29.84■■■□□ 2.37
ZNF428Q96B54 AC137630.3-201ENST00000607245 391 ntBASIC29.84■■■□□ 2.37
ZNF428Q96B54 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
ZNF428Q96B54 AL161729.1-201ENST00000604104 1402 ntBASIC29.84■■■□□ 2.37
ZNF428Q96B54 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC29.84■■■□□ 2.37
ZNF428Q96B54 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC29.84■■■□□ 2.37
ZNF428Q96B54 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC29.84■■■□□ 2.37
ZNF428Q96B54 PREB-202ENST00000406567 1910 ntTSL 5 BASIC29.84■■■□□ 2.37
ZNF428Q96B54 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
ZNF428Q96B54 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
ZNF428Q96B54 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
ZNF428Q96B54 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
ZNF428Q96B54 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC29.82■■■□□ 2.36
ZNF428Q96B54 AC021242.3-201ENST00000607598 1377 ntBASIC29.82■■■□□ 2.36
ZNF428Q96B54 KRT16P3-201ENST00000439127 1283 ntBASIC29.82■■■□□ 2.36
ZNF428Q96B54 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC29.82■■■□□ 2.36
ZNF428Q96B54 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC29.82■■■□□ 2.36
ZNF428Q96B54 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC29.82■■■□□ 2.36
ZNF428Q96B54 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
ZNF428Q96B54 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
ZNF428Q96B54 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC29.81■■■□□ 2.36
ZNF428Q96B54 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
ZNF428Q96B54 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC29.81■■■□□ 2.36
ZNF428Q96B54 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC29.81■■■□□ 2.36
ZNF428Q96B54 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC29.81■■■□□ 2.36
ZNF428Q96B54 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
ZNF428Q96B54 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
ZNF428Q96B54 LINC01124-201ENST00000409786 2117 ntBASIC29.8■■■□□ 2.36
ZNF428Q96B54 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
ZNF428Q96B54 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
ZNF428Q96B54 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC29.8■■■□□ 2.36
ZNF428Q96B54 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC29.8■■■□□ 2.36
ZNF428Q96B54 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC29.8■■■□□ 2.36
ZNF428Q96B54 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC29.8■■■□□ 2.36
ZNF428Q96B54 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC29.8■■■□□ 2.36
ZNF428Q96B54 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
ZNF428Q96B54 AF131216.4-201ENST00000638924 1588 ntBASIC29.8■■■□□ 2.36
ZNF428Q96B54 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
ZNF428Q96B54 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC29.79■■■□□ 2.36
ZNF428Q96B54 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
ZNF428Q96B54 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
ZNF428Q96B54 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC29.79■■■□□ 2.36
ZNF428Q96B54 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC29.79■■■□□ 2.36
ZNF428Q96B54 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC29.79■■■□□ 2.36
ZNF428Q96B54 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
ZNF428Q96B54 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
ZNF428Q96B54 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC29.78■■■□□ 2.36
ZNF428Q96B54 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
ZNF428Q96B54 SENP5-202ENST00000419026 973 ntTSL 3 BASIC29.77■■■□□ 2.36
ZNF428Q96B54 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC29.77■■■□□ 2.36
ZNF428Q96B54 CD37-213ENST00000598095 1598 ntTSL 2 BASIC29.77■■■□□ 2.36
ZNF428Q96B54 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC29.76■■■□□ 2.36
ZNF428Q96B54 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.36
ZNF428Q96B54 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
ZNF428Q96B54 TMEM202-AS1-202ENST00000565181 2325 ntBASIC29.76■■■□□ 2.35
ZNF428Q96B54 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
ZNF428Q96B54 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC29.76■■■□□ 2.35
ZNF428Q96B54 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC29.75■■■□□ 2.35
ZNF428Q96B54 LBH-205ENST00000407930 756 ntTSL 2 BASIC29.75■■■□□ 2.35
ZNF428Q96B54 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC29.75■■■□□ 2.35
ZNF428Q96B54 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC29.75■■■□□ 2.35
ZNF428Q96B54 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC29.75■■■□□ 2.35
ZNF428Q96B54 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC29.75■■■□□ 2.35
ZNF428Q96B54 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC29.75■■■□□ 2.35
ZNF428Q96B54 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC29.74■■■□□ 2.35
ZNF428Q96B54 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC29.74■■■□□ 2.35
ZNF428Q96B54 AC092028.1-203ENST00000608262 953 ntBASIC29.74■■■□□ 2.35
ZNF428Q96B54 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
ZNF428Q96B54 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
ZNF428Q96B54 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
ZNF428Q96B54 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC29.73■■■□□ 2.35
ZNF428Q96B54 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC29.73■■■□□ 2.35
ZNF428Q96B54 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC29.73■■■□□ 2.35
ZNF428Q96B54 TRIR-202ENST00000588213 841 ntTSL 3 BASIC29.73■■■□□ 2.35
ZNF428Q96B54 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC29.73■■■□□ 2.35
ZNF428Q96B54 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
ZNF428Q96B54 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC29.72■■■□□ 2.35
ZNF428Q96B54 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
ZNF428Q96B54 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
ZNF428Q96B54 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC29.72■■■□□ 2.35
ZNF428Q96B54 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC29.72■■■□□ 2.35
ZNF428Q96B54 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC29.72■■■□□ 2.35
ZNF428Q96B54 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC29.72■■■□□ 2.35
ZNF428Q96B54 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC29.72■■■□□ 2.35
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms