Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
APOC4P55056 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
APOC4P55056 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
APOC4P55056 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
APOC4P55056 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC16.95■□□□□ 0.3
APOC4P55056 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC16.95■□□□□ 0.3
APOC4P55056 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
APOC4P55056 LSM4-201ENST00000252816 986 ntTSL 2 BASIC16.95■□□□□ 0.3
APOC4P55056 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
APOC4P55056 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
APOC4P55056 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC16.95■□□□□ 0.3
APOC4P55056 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC16.95■□□□□ 0.3
APOC4P55056 AL117332.1-201ENST00000622628 974 ntBASIC16.95■□□□□ 0.3
APOC4P55056 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
APOC4P55056 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
APOC4P55056 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC16.94■□□□□ 0.3
APOC4P55056 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
APOC4P55056 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
APOC4P55056 RPP21-222ENST00000433076 577 ntTSL 2 BASIC16.94■□□□□ 0.3
APOC4P55056 AC004448.1-201ENST00000458332 883 ntBASIC16.94■□□□□ 0.3
APOC4P55056 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC16.94■□□□□ 0.3
APOC4P55056 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
APOC4P55056 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
APOC4P55056 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC16.94■□□□□ 0.3
APOC4P55056 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
APOC4P55056 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC16.93■□□□□ 0.3
APOC4P55056 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
APOC4P55056 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC16.93■□□□□ 0.3
APOC4P55056 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC16.93■□□□□ 0.3
APOC4P55056 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC16.93■□□□□ 0.3
APOC4P55056 MIR3621-201ENST00000580529 85 ntBASIC16.93■□□□□ 0.3
APOC4P55056 TRIR-202ENST00000588213 841 ntTSL 3 BASIC16.93■□□□□ 0.3
APOC4P55056 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
APOC4P55056 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
APOC4P55056 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
APOC4P55056 AL022069.1-201ENST00000568025 1636 ntBASIC16.92■□□□□ 0.3
APOC4P55056 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
APOC4P55056 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
APOC4P55056 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC16.92■□□□□ 0.3
APOC4P55056 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
APOC4P55056 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
APOC4P55056 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
APOC4P55056 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC16.91■□□□□ 0.3
APOC4P55056 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
APOC4P55056 LSR-205ENST00000427250 1606 ntTSL 2 BASIC16.91■□□□□ 0.3
APOC4P55056 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
APOC4P55056 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
APOC4P55056 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
APOC4P55056 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
APOC4P55056 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
APOC4P55056 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
APOC4P55056 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC16.9■□□□□ 0.3
APOC4P55056 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC16.9■□□□□ 0.3
APOC4P55056 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
APOC4P55056 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
APOC4P55056 AC005703.6-201ENST00000623265 1329 ntBASIC16.9■□□□□ 0.3
APOC4P55056 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
APOC4P55056 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC16.89■□□□□ 0.3
APOC4P55056 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC16.89■□□□□ 0.3
APOC4P55056 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC16.89■□□□□ 0.3
APOC4P55056 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.3
APOC4P55056 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
APOC4P55056 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
APOC4P55056 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
APOC4P55056 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
APOC4P55056 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC16.89■□□□□ 0.29
APOC4P55056 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
APOC4P55056 PEMT-206ENST00000435340 960 ntTSL 5 BASIC16.89■□□□□ 0.29
APOC4P55056 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC16.89■□□□□ 0.29
APOC4P55056 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
APOC4P55056 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
APOC4P55056 AL161729.1-201ENST00000604104 1402 ntBASIC16.88■□□□□ 0.29
APOC4P55056 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
APOC4P55056 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
APOC4P55056 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
APOC4P55056 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
APOC4P55056 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
APOC4P55056 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC16.88■□□□□ 0.29
APOC4P55056 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
APOC4P55056 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
APOC4P55056 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
APOC4P55056 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
APOC4P55056 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC16.87■□□□□ 0.29
APOC4P55056 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
APOC4P55056 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
APOC4P55056 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
APOC4P55056 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC16.87■□□□□ 0.29
APOC4P55056 AC131281.2-201ENST00000520478 145 ntBASIC16.87■□□□□ 0.29
APOC4P55056 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
APOC4P55056 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC16.87■□□□□ 0.29
APOC4P55056 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC16.87■□□□□ 0.29
APOC4P55056 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
APOC4P55056 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
APOC4P55056 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
APOC4P55056 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
APOC4P55056 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
APOC4P55056 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
APOC4P55056 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
APOC4P55056 AL136116.3-201ENST00000402907 1138 ntBASIC16.86■□□□□ 0.29
APOC4P55056 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms