Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC21.13■□□□□ 0.97
RFC3P40938 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RFC3P40938 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
RFC3P40938 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC21.13■□□□□ 0.97
RFC3P40938 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC21.12■□□□□ 0.97
RFC3P40938 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC21.12■□□□□ 0.97
RFC3P40938 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
RFC3P40938 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RFC3P40938 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC21.11■□□□□ 0.97
RFC3P40938 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC21.11■□□□□ 0.97
RFC3P40938 AC019069.1-201ENST00000610008 1333 ntBASIC21.11■□□□□ 0.97
RFC3P40938 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RFC3P40938 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RFC3P40938 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC21.11■□□□□ 0.97
RFC3P40938 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RFC3P40938 LBH-205ENST00000407930 756 ntTSL 2 BASIC21.11■□□□□ 0.97
RFC3P40938 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
RFC3P40938 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC21.11■□□□□ 0.97
RFC3P40938 LTK-203ENST00000453182 2412 ntTSL 2 BASIC21.11■□□□□ 0.97
RFC3P40938 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC21.1■□□□□ 0.97
RFC3P40938 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RFC3P40938 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RFC3P40938 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
RFC3P40938 CLTA-206ENST00000466396 695 ntTSL 2 BASIC21.1■□□□□ 0.97
RFC3P40938 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC21.1■□□□□ 0.97
RFC3P40938 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RFC3P40938 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
RFC3P40938 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
RFC3P40938 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RFC3P40938 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RFC3P40938 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RFC3P40938 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
RFC3P40938 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC21.09■□□□□ 0.97
RFC3P40938 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RFC3P40938 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RFC3P40938 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RFC3P40938 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC21.09■□□□□ 0.97
RFC3P40938 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RFC3P40938 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC21.09■□□□□ 0.97
RFC3P40938 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RFC3P40938 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC21.09■□□□□ 0.97
RFC3P40938 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
RFC3P40938 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC21.08■□□□□ 0.97
RFC3P40938 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RFC3P40938 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
RFC3P40938 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC21.08■□□□□ 0.97
RFC3P40938 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RFC3P40938 TFPT-201ENST00000391757 774 ntTSL 5 BASIC21.08■□□□□ 0.97
RFC3P40938 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
RFC3P40938 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC21.08■□□□□ 0.97
RFC3P40938 MIR4466-201ENST00000606121 54 ntBASIC21.08■□□□□ 0.97
RFC3P40938 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
RFC3P40938 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
RFC3P40938 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC21.08■□□□□ 0.96
RFC3P40938 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RFC3P40938 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RFC3P40938 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RFC3P40938 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC21.07■□□□□ 0.96
RFC3P40938 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC21.07■□□□□ 0.96
RFC3P40938 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
RFC3P40938 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC21.07■□□□□ 0.96
RFC3P40938 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RFC3P40938 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RFC3P40938 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
RFC3P40938 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RFC3P40938 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RFC3P40938 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RFC3P40938 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
RFC3P40938 QDPR-206ENST00000508623 601 ntTSL 3 BASIC21.06■□□□□ 0.96
RFC3P40938 RASSF1-AS1-201ENST00000629828 790 ntBASIC21.06■□□□□ 0.96
RFC3P40938 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
RFC3P40938 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC21.06■□□□□ 0.96
RFC3P40938 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
RFC3P40938 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RFC3P40938 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
RFC3P40938 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC21.05■□□□□ 0.96
RFC3P40938 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC21.05■□□□□ 0.96
RFC3P40938 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RFC3P40938 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RFC3P40938 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RFC3P40938 NALT1-201ENST00000429224 738 ntTSL 5 BASIC21.04■□□□□ 0.96
RFC3P40938 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RFC3P40938 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RFC3P40938 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RFC3P40938 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RFC3P40938 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RFC3P40938 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
RFC3P40938 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
RFC3P40938 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC21.03■□□□□ 0.96
RFC3P40938 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RFC3P40938 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RFC3P40938 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RFC3P40938 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RFC3P40938 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC21.03■□□□□ 0.96
RFC3P40938 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC21.03■□□□□ 0.96
RFC3P40938 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
RFC3P40938 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RFC3P40938 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RFC3P40938 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RFC3P40938 AL512631.2-201ENST00000604634 923 ntBASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms