Protein–RNA interactions for Protein: P27695

APEX1, DNA-(apurinic or apyrimidinic site) lyase, humanhuman

Known RBP Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1P27695 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC20.73■□□□□ 0.91
APEX1P27695 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.73■□□□□ 0.91
APEX1P27695 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
APEX1P27695 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
APEX1P27695 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
APEX1P27695 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
APEX1P27695 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
APEX1P27695 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
APEX1P27695 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
APEX1P27695 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC20.72■□□□□ 0.91
APEX1P27695 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
APEX1P27695 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.72■□□□□ 0.91
APEX1P27695 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
APEX1P27695 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
APEX1P27695 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
APEX1P27695 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
APEX1P27695 IDNK-203ENST00000405990 629 ntTSL 2 BASIC20.71■□□□□ 0.91
APEX1P27695 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
APEX1P27695 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC20.71■□□□□ 0.91
APEX1P27695 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
APEX1P27695 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
APEX1P27695 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
APEX1P27695 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
APEX1P27695 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
APEX1P27695 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
APEX1P27695 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
APEX1P27695 RPS2P7-201ENST00000447334 885 ntBASIC20.7■□□□□ 0.9
APEX1P27695 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
APEX1P27695 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
APEX1P27695 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
APEX1P27695 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.7■□□□□ 0.9
APEX1P27695 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC20.7■□□□□ 0.9
APEX1P27695 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
APEX1P27695 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.69■□□□□ 0.9
APEX1P27695 C9orf163-202ENST00000624034 2573 ntBASIC20.69■□□□□ 0.9
APEX1P27695 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
APEX1P27695 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
APEX1P27695 SLC6A10P-202ENST00000431994 2058 ntBASIC20.69■□□□□ 0.9
APEX1P27695 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
APEX1P27695 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
APEX1P27695 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
APEX1P27695 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
APEX1P27695 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
APEX1P27695 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
APEX1P27695 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.68■□□□□ 0.9
APEX1P27695 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
APEX1P27695 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
APEX1P27695 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC20.68■□□□□ 0.9
APEX1P27695 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
APEX1P27695 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
APEX1P27695 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
APEX1P27695 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
APEX1P27695 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
APEX1P27695 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
APEX1P27695 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC20.67■□□□□ 0.9
APEX1P27695 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
APEX1P27695 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
APEX1P27695 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
APEX1P27695 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
APEX1P27695 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
APEX1P27695 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
APEX1P27695 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
APEX1P27695 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC20.66■□□□□ 0.9
APEX1P27695 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
APEX1P27695 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
APEX1P27695 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
APEX1P27695 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
APEX1P27695 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
APEX1P27695 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
APEX1P27695 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
APEX1P27695 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
APEX1P27695 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC20.65■□□□□ 0.9
APEX1P27695 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
APEX1P27695 AC087393.1-201ENST00000582896 145 ntBASIC20.65■□□□□ 0.9
APEX1P27695 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.65■□□□□ 0.9
APEX1P27695 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
APEX1P27695 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
APEX1P27695 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
APEX1P27695 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
APEX1P27695 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC20.64■□□□□ 0.89
APEX1P27695 HYI-210ENST00000486909 905 ntTSL 5 BASIC20.64■□□□□ 0.89
APEX1P27695 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
APEX1P27695 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC20.64■□□□□ 0.89
APEX1P27695 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC20.64■□□□□ 0.89
APEX1P27695 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC20.64■□□□□ 0.89
APEX1P27695 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC20.64■□□□□ 0.89
APEX1P27695 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
APEX1P27695 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
APEX1P27695 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
APEX1P27695 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
APEX1P27695 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
APEX1P27695 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.64■□□□□ 0.89
APEX1P27695 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC20.64■□□□□ 0.89
APEX1P27695 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
APEX1P27695 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
APEX1P27695 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
APEX1P27695 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
APEX1P27695 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
APEX1P27695 AC139795.1-202ENST00000500444 432 ntBASIC20.63■□□□□ 0.89
APEX1P27695 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms