Protein–RNA interactions for Protein: P13500

CCL2, C-C motif chemokine 2, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL2P13500 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCL2P13500 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
CCL2P13500 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CCL2P13500 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCL2P13500 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCL2P13500 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC20.11■□□□□ 0.81
CCL2P13500 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC20.11■□□□□ 0.81
CCL2P13500 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCL2P13500 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCL2P13500 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC20.11■□□□□ 0.81
CCL2P13500 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCL2P13500 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CCL2P13500 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CCL2P13500 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
CCL2P13500 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
CCL2P13500 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCL2P13500 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC20.09■□□□□ 0.81
CCL2P13500 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCL2P13500 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC20.09■□□□□ 0.81
CCL2P13500 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
CCL2P13500 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CCL2P13500 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCL2P13500 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
CCL2P13500 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCL2P13500 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC20.09■□□□□ 0.81
CCL2P13500 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCL2P13500 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CCL2P13500 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC20.08■□□□□ 0.81
CCL2P13500 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC20.08■□□□□ 0.81
CCL2P13500 AL035685.1-201ENST00000636663 812 ntBASIC20.08■□□□□ 0.81
CCL2P13500 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.08■□□□□ 0.8
CCL2P13500 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CCL2P13500 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CCL2P13500 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
CCL2P13500 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CCL2P13500 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
CCL2P13500 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
CCL2P13500 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
CCL2P13500 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCL2P13500 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCL2P13500 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
CCL2P13500 BX664725.1-201ENST00000438252 379 ntBASIC20.07■□□□□ 0.8
CCL2P13500 AC239859.2-201ENST00000444165 318 ntBASIC20.07■□□□□ 0.8
CCL2P13500 AC137630.3-201ENST00000607245 391 ntBASIC20.07■□□□□ 0.8
CCL2P13500 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC20.07■□□□□ 0.8
CCL2P13500 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CCL2P13500 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
CCL2P13500 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC20.06■□□□□ 0.8
CCL2P13500 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC20.06■□□□□ 0.8
CCL2P13500 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
CCL2P13500 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CCL2P13500 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCL2P13500 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCL2P13500 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CCL2P13500 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CCL2P13500 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
CCL2P13500 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC20.05■□□□□ 0.8
CCL2P13500 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC20.05■□□□□ 0.8
CCL2P13500 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC20.05■□□□□ 0.8
CCL2P13500 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCL2P13500 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CCL2P13500 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCL2P13500 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCL2P13500 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCL2P13500 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CCL2P13500 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CCL2P13500 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.04■□□□□ 0.8
CCL2P13500 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CCL2P13500 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CCL2P13500 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CCL2P13500 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CCL2P13500 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC20.04■□□□□ 0.8
CCL2P13500 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC20.04■□□□□ 0.8
CCL2P13500 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCL2P13500 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCL2P13500 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCL2P13500 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC20.03■□□□□ 0.8
CCL2P13500 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC20.03■□□□□ 0.8
CCL2P13500 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCL2P13500 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCL2P13500 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
CCL2P13500 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC20.03■□□□□ 0.8
CCL2P13500 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC20.03■□□□□ 0.8
CCL2P13500 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CCL2P13500 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCL2P13500 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCL2P13500 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC20.03■□□□□ 0.8
CCL2P13500 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CCL2P13500 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCL2P13500 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCL2P13500 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCL2P13500 LINC00543-201ENST00000567234 1845 ntBASIC20.02■□□□□ 0.8
CCL2P13500 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCL2P13500 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCL2P13500 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC20.02■□□□□ 0.8
CCL2P13500 LBH-205ENST00000407930 756 ntTSL 2 BASIC20.02■□□□□ 0.8
CCL2P13500 KRT125P-201ENST00000546827 989 ntBASIC20.02■□□□□ 0.8
CCL2P13500 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC20.02■□□□□ 0.8
CCL2P13500 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC20.02■□□□□ 0.8
CCL2P13500 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms