Protein–RNA interactions for Protein: P04155

TFF1, Trefoil factor 1, humanhuman

Predictions only

Length 84 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFF1P04155 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TFF1P04155 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
TFF1P04155 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TFF1P04155 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TFF1P04155 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TFF1P04155 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
TFF1P04155 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TFF1P04155 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TFF1P04155 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TFF1P04155 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC19.4■□□□□ 0.7
TFF1P04155 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TFF1P04155 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC19.39■□□□□ 0.7
TFF1P04155 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
TFF1P04155 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC19.39■□□□□ 0.69
TFF1P04155 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
TFF1P04155 ABCB10P4-201ENST00000566803 2184 ntBASIC19.39■□□□□ 0.69
TFF1P04155 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TFF1P04155 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TFF1P04155 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
TFF1P04155 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TFF1P04155 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TFF1P04155 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TFF1P04155 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
TFF1P04155 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TFF1P04155 LINC00543-201ENST00000567234 1845 ntBASIC19.39■□□□□ 0.69
TFF1P04155 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TFF1P04155 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
TFF1P04155 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TFF1P04155 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
TFF1P04155 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
TFF1P04155 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TFF1P04155 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC19.38■□□□□ 0.69
TFF1P04155 AL451085.2-201ENST00000605085 799 ntBASIC19.38■□□□□ 0.69
TFF1P04155 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TFF1P04155 AF131216.4-201ENST00000638924 1588 ntBASIC19.38■□□□□ 0.69
TFF1P04155 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC19.37■□□□□ 0.69
TFF1P04155 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
TFF1P04155 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TFF1P04155 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TFF1P04155 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TFF1P04155 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TFF1P04155 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TFF1P04155 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TFF1P04155 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
TFF1P04155 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TFF1P04155 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TFF1P04155 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC19.36■□□□□ 0.69
TFF1P04155 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TFF1P04155 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC19.36■□□□□ 0.69
TFF1P04155 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC19.36■□□□□ 0.69
TFF1P04155 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
TFF1P04155 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TFF1P04155 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TFF1P04155 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TFF1P04155 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TFF1P04155 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TFF1P04155 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC19.35■□□□□ 0.69
TFF1P04155 PRTG-204ENST00000561292 833 ntTSL 3 BASIC19.35■□□□□ 0.69
TFF1P04155 TK2-216ENST00000564917 1156 ntTSL 3 BASIC19.35■□□□□ 0.69
TFF1P04155 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC19.35■□□□□ 0.69
TFF1P04155 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC19.35■□□□□ 0.69
TFF1P04155 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TFF1P04155 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
TFF1P04155 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
TFF1P04155 THRA-202ENST00000394121 2260 ntTSL 2 BASIC19.35■□□□□ 0.69
TFF1P04155 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
TFF1P04155 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TFF1P04155 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC19.34■□□□□ 0.69
TFF1P04155 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
TFF1P04155 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
TFF1P04155 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
TFF1P04155 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC19.34■□□□□ 0.69
TFF1P04155 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TFF1P04155 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
TFF1P04155 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC19.33■□□□□ 0.69
TFF1P04155 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
TFF1P04155 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC19.33■□□□□ 0.68
TFF1P04155 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC19.33■□□□□ 0.68
TFF1P04155 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TFF1P04155 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
TFF1P04155 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TFF1P04155 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
TFF1P04155 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TFF1P04155 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC19.33■□□□□ 0.68
TFF1P04155 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TFF1P04155 AC131274.2-201ENST00000580697 1507 ntBASIC19.32■□□□□ 0.68
TFF1P04155 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC19.32■□□□□ 0.68
TFF1P04155 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC19.32■□□□□ 0.68
TFF1P04155 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
TFF1P04155 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
TFF1P04155 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TFF1P04155 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TFF1P04155 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC19.31■□□□□ 0.68
TFF1P04155 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TFF1P04155 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
TFF1P04155 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
TFF1P04155 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC19.31■□□□□ 0.68
TFF1P04155 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC19.31■□□□□ 0.68
TFF1P04155 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TFF1P04155 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms