Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
IFNA1P01562 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
IFNA1P01562 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
IFNA1P01562 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
IFNA1P01562 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
IFNA1P01562 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC18.27■□□□□ 0.52
IFNA1P01562 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
IFNA1P01562 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
IFNA1P01562 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC18.27■□□□□ 0.52
IFNA1P01562 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
IFNA1P01562 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
IFNA1P01562 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC18.27■□□□□ 0.51
IFNA1P01562 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
IFNA1P01562 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
IFNA1P01562 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
IFNA1P01562 RPS2-210ENST00000530225 765 ntTSL 2 BASIC18.26■□□□□ 0.51
IFNA1P01562 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC18.26■□□□□ 0.51
IFNA1P01562 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
IFNA1P01562 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC18.26■□□□□ 0.51
IFNA1P01562 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
IFNA1P01562 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
IFNA1P01562 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
IFNA1P01562 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
IFNA1P01562 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC18.25■□□□□ 0.51
IFNA1P01562 AC137767.1-201ENST00000602918 1920 ntBASIC18.25■□□□□ 0.51
IFNA1P01562 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
IFNA1P01562 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC18.25■□□□□ 0.51
IFNA1P01562 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
IFNA1P01562 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
IFNA1P01562 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
IFNA1P01562 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
IFNA1P01562 AC005559.1-201ENST00000589661 871 ntBASIC18.25■□□□□ 0.51
IFNA1P01562 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC18.25■□□□□ 0.51
IFNA1P01562 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
IFNA1P01562 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
IFNA1P01562 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
IFNA1P01562 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
IFNA1P01562 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
IFNA1P01562 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
IFNA1P01562 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
IFNA1P01562 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
IFNA1P01562 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
IFNA1P01562 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
IFNA1P01562 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
IFNA1P01562 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC18.24■□□□□ 0.51
IFNA1P01562 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
IFNA1P01562 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
IFNA1P01562 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
IFNA1P01562 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC18.23■□□□□ 0.51
IFNA1P01562 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
IFNA1P01562 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
IFNA1P01562 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
IFNA1P01562 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
IFNA1P01562 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
IFNA1P01562 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
IFNA1P01562 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
IFNA1P01562 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC18.23■□□□□ 0.51
IFNA1P01562 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
IFNA1P01562 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
IFNA1P01562 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
IFNA1P01562 LINC00526-201ENST00000581067 1875 ntBASIC18.22■□□□□ 0.51
IFNA1P01562 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
IFNA1P01562 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
IFNA1P01562 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
IFNA1P01562 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
IFNA1P01562 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC18.22■□□□□ 0.51
IFNA1P01562 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
IFNA1P01562 MIR6089-201ENST00000616698 64 ntBASIC18.22■□□□□ 0.51
IFNA1P01562 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
IFNA1P01562 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
IFNA1P01562 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
IFNA1P01562 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
IFNA1P01562 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
IFNA1P01562 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
IFNA1P01562 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
IFNA1P01562 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
IFNA1P01562 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC18.21■□□□□ 0.51
IFNA1P01562 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
IFNA1P01562 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
IFNA1P01562 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC18.21■□□□□ 0.51
IFNA1P01562 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
IFNA1P01562 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
IFNA1P01562 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
IFNA1P01562 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
IFNA1P01562 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.5
IFNA1P01562 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
IFNA1P01562 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
IFNA1P01562 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
IFNA1P01562 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
IFNA1P01562 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
IFNA1P01562 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
IFNA1P01562 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
IFNA1P01562 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
IFNA1P01562 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
IFNA1P01562 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC18.2■□□□□ 0.5
IFNA1P01562 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
IFNA1P01562 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC18.2■□□□□ 0.5
IFNA1P01562 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
IFNA1P01562 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC18.2■□□□□ 0.5
IFNA1P01562 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms