Protein–RNA interactions for Protein: O13535

TY1B-H, Transposon Ty1-H Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,793 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-HO13535 FUM1YPL262W 1467 nt7.28□□□□□ -1.24
TY1B-HO13535 VTS1YOR359W 1572 nt7.27□□□□□ -1.24
TY1B-HO13535 AVT4YNL101W 2142 nt7.27□□□□□ -1.25
TY1B-HO13535 EDC3YEL015W 1656 nt7.27□□□□□ -1.25
TY1B-HO13535 ASK10YGR097W 3441 nt7.27□□□□□ -1.25
TY1B-HO13535 DAK1YML070W 1755 nt7.26□□□□□ -1.25
TY1B-HO13535 TRS23YDR246W 660 nt7.25□□□□□ -1.25
TY1B-HO13535 RRP3YHR065C 1506 nt7.25□□□□□ -1.25
TY1B-HO13535 IMA2YOL157C 1770 nt7.25□□□□□ -1.25
TY1B-HO13535 RRP40YOL142W 723 nt7.25□□□□□ -1.25
TY1B-HO13535 YGL152CYGL152C 678 nt7.23□□□□□ -1.25
TY1B-HO13535 MPM1YJL066C 759 nt7.23□□□□□ -1.25
TY1B-HO13535 NKP2YLR315W 462 nt7.23□□□□□ -1.25
TY1B-HO13535 YNL181WYNL181W 1224 nt7.23□□□□□ -1.25
TY1B-HO13535 TMA17YDL110C 453 nt7.23□□□□□ -1.25
TY1B-HO13535 YJL107CYJL107C 1164 nt7.23□□□□□ -1.25
TY1B-HO13535 UBI4YLL039C 1146 nt7.23□□□□□ -1.25
TY1B-HO13535 STE50YCL032W 1041 nt7.23□□□□□ -1.25
TY1B-HO13535 DPH6YLR143W 2058 nt7.22□□□□□ -1.25
TY1B-HO13535 TUB3YML124C 1338 nt7.22□□□□□ -1.25
TY1B-HO13535 DBP8YHR169W 1296 nt7.21□□□□□ -1.25
TY1B-HO13535 MRPL20YKR085C 588 nt7.21□□□□□ -1.25
TY1B-HO13535 ALG6YOR002W 1635 nt7.2□□□□□ -1.26
TY1B-HO13535 SED4YCR067C 3198 nt7.2□□□□□ -1.26
TY1B-HO13535 COP1YDL145C 3606 nt7.2□□□□□ -1.26
TY1B-HO13535 RPL19AYBR084C-A 570 nt7.19□□□□□ -1.26
TY1B-HO13535 BSC5YNR069C 1470 nt7.19□□□□□ -1.26
TY1B-HO13535 CUE2YKL090W 1332 nt7.19□□□□□ -1.26
TY1B-HO13535 ATH1YPR026W 3636 nt7.19□□□□□ -1.26
TY1B-HO13535 RAT1YOR048C 3021 nt7.18□□□□□ -1.26
TY1B-HO13535 YPR071WYPR071W 636 nt7.18□□□□□ -1.26
TY1B-HO13535 MTC5YDR128W 3447 nt7.18□□□□□ -1.26
TY1B-HO13535 YDR417CYDR417C 372 nt7.18□□□□□ -1.26
TY1B-HO13535 MTF1YMR228W 1026 nt7.18□□□□□ -1.26
TY1B-HO13535 APC4YDR118W 1959 nt7.17□□□□□ -1.26
TY1B-HO13535 YMR196WYMR196W 3267 nt7.17□□□□□ -1.26
TY1B-HO13535 CLB2YPR119W 1476 nt7.17□□□□□ -1.26
TY1B-HO13535 AMA1YGR225W 1782 nt7.17□□□□□ -1.26
TY1B-HO13535 YGR153WYGR153W 654 nt7.16□□□□□ -1.26
TY1B-HO13535 SLT2YHR030C 1455 nt7.16□□□□□ -1.26
TY1B-HO13535 SGE1YPR198W 1632 nt7.16□□□□□ -1.26
TY1B-HO13535 MCM5YLR274W 2328 nt7.16□□□□□ -1.26
TY1B-HO13535 KRE28YDR532C 1158 nt7.15□□□□□ -1.26
TY1B-HO13535 YNG1YOR064C 660 nt7.15□□□□□ -1.26
TY1B-HO13535 RTC5YOR118W 1704 nt7.15□□□□□ -1.26
TY1B-HO13535 RAD30YDR419W 1899 nt7.15□□□□□ -1.26
TY1B-HO13535 YER145C-AYER145C-A 438 nt7.15□□□□□ -1.27
TY1B-HO13535 TLG2YOL018C 1194 nt7.15□□□□□ -1.27
TY1B-HO13535 CLP1YOR250C 1338 nt7.15□□□□□ -1.27
TY1B-HO13535 CBF5YLR175W 1452 nt7.15□□□□□ -1.27
TY1B-HO13535 CAF4YKR036C 1932 nt7.14□□□□□ -1.27
TY1B-HO13535 VHS1YDR247W 1386 nt7.14□□□□□ -1.27
TY1B-HO13535 YMR245WYMR245W 621 nt7.14□□□□□ -1.27
TY1B-HO13535 IDP3YNL009W 1263 nt7.14□□□□□ -1.27
TY1B-HO13535 KEX1YGL203C 2190 nt7.13□□□□□ -1.27
TY1B-HO13535 SNA2YDR525W-A 240 nt7.13□□□□□ -1.27
TY1B-HO13535 ISY1YJR050W 708 nt7.13□□□□□ -1.27
TY1B-HO13535 YBL006W-AYBL006W-A 150 nt7.13□□□□□ -1.27
TY1B-HO13535 TBF1YPL128C 1689 nt7.13□□□□□ -1.27
TY1B-HO13535 MTR10YOR160W 2919 nt7.13□□□□□ -1.27
TY1B-HO13535 RPL14AYKL006W 417 nt7.13□□□□□ -1.27
TY1B-HO13535 RER1YCL001W 567 nt7.13□□□□□ -1.27
TY1B-HO13535 SSZ1YHR064C 1617 nt7.12□□□□□ -1.27
TY1B-HO13535 LUC7YDL087C 786 nt7.12□□□□□ -1.27
TY1B-HO13535 GDH2YDL215C 3279 nt7.12□□□□□ -1.27
TY1B-HO13535 PTK2YJR059W 2457 nt7.11□□□□□ -1.27
TY1B-HO13535 TYW3YGL050W 822 nt7.11□□□□□ -1.27
TY1B-HO13535 LYP1YNL268W 1836 nt7.11□□□□□ -1.27
TY1B-HO13535 RAP1YNL216W 2484 nt7.11□□□□□ -1.27
TY1B-HO13535 API2YDR525W 330 nt7.1□□□□□ -1.27
TY1B-HO13535 YLR154W-BYLR154W-B 165 nt7.1□□□□□ -1.27
TY1B-HO13535 BUD22YMR014W 1560 nt7.1□□□□□ -1.27
TY1B-HO13535 CTS2YDR371W 1536 nt7.1□□□□□ -1.27
TY1B-HO13535 VCX1YDL128W 1236 nt7.09□□□□□ -1.27
TY1B-HO13535 AIM7YDR063W 450 nt7.09□□□□□ -1.27
TY1B-HO13535 RGD1YBR260C 2001 nt7.08□□□□□ -1.28
TY1B-HO13535 PHM7YOL084W 2976 nt7.08□□□□□ -1.28
TY1B-HO13535 GAD1YMR250W 1758 nt7.07□□□□□ -1.28
TY1B-HO13535 SNU66YOR308C 1764 nt7.07□□□□□ -1.28
TY1B-HO13535 SUP35YDR172W 2058 nt7.07□□□□□ -1.28
TY1B-HO13535 RRN9YMR270C 1098 nt7.07□□□□□ -1.28
TY1B-HO13535 ZPS1YOL154W 750 nt7.07□□□□□ -1.28
TY1B-HO13535 RFA1YAR007C 1866 nt7.07□□□□□ -1.28
TY1B-HO13535 RIO1YOR119C 1455 nt7.07□□□□□ -1.28
TY1B-HO13535 CBK1YNL161W 2271 nt7.07□□□□□ -1.28
TY1B-HO13535 YMR102CYMR102C 2505 nt7.06□□□□□ -1.28
TY1B-HO13535 YCR085WYCR085W 354 nt7.06□□□□□ -1.28
TY1B-HO13535 MID2YLR332W 1131 nt7.06□□□□□ -1.28
TY1B-HO13535 DSC2YOL073C 969 nt7.06□□□□□ -1.28
TY1B-HO13535 PRO2YOR323C 1371 nt7.06□□□□□ -1.28
TY1B-HO13535 ARO80YDR421W 2853 nt7.06□□□□□ -1.28
TY1B-HO13535 RET1YOR207C 3450 nt7.06□□□□□ -1.28
TY1B-HO13535 VMA2YBR127C 1554 nt7.05□□□□□ -1.28
TY1B-HO13535 ROT2YBR229C 2865 nt7.05□□□□□ -1.28
TY1B-HO13535 RGT1YKL038W 3513 nt7.05□□□□□ -1.28
TY1B-HO13535 FRA2YGL220W 363 nt7.05□□□□□ -1.28
TY1B-HO13535 TAF11YML015C 1041 nt7.04□□□□□ -1.28
TY1B-HO13535 GSY1YFR015C 2127 nt7.04□□□□□ -1.28
TY1B-HO13535 NTE1YML059C 5040 nt7.04□□□□□ -1.28
TY1B-HO13535 RSC6YCR052W 1452 nt7.03□□□□□ -1.28
Retrieved 100 of 7,029 protein–RNA pairs in 15.2 ms