Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
DDX39AO00148 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC26.09■■□□□ 1.77
DDX39AO00148 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
DDX39AO00148 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
DDX39AO00148 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC26.09■■□□□ 1.77
DDX39AO00148 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
DDX39AO00148 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC26.09■■□□□ 1.77
DDX39AO00148 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
DDX39AO00148 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC26.08■■□□□ 1.77
DDX39AO00148 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC26.08■■□□□ 1.77
DDX39AO00148 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC26.08■■□□□ 1.76
DDX39AO00148 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
DDX39AO00148 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
DDX39AO00148 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC26.07■■□□□ 1.76
DDX39AO00148 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC26.07■■□□□ 1.76
DDX39AO00148 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC26.07■■□□□ 1.76
DDX39AO00148 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC26.07■■□□□ 1.76
DDX39AO00148 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC26.07■■□□□ 1.76
DDX39AO00148 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC26.07■■□□□ 1.76
DDX39AO00148 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
DDX39AO00148 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
DDX39AO00148 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC26.06■■□□□ 1.76
DDX39AO00148 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
DDX39AO00148 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC26.05■■□□□ 1.76
DDX39AO00148 CD72-202ENST00000378430 585 ntTSL 3 BASIC26.05■■□□□ 1.76
DDX39AO00148 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC26.05■■□□□ 1.76
DDX39AO00148 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
DDX39AO00148 HLA-L-211ENST00000482052 1765 ntBASIC26.05■■□□□ 1.76
DDX39AO00148 AC138932.3-201ENST00000567634 1902 ntBASIC26.04■■□□□ 1.76
DDX39AO00148 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
DDX39AO00148 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC26.04■■□□□ 1.76
DDX39AO00148 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC26.04■■□□□ 1.76
DDX39AO00148 EXOG-217ENST00000630638 197 ntTSL 5 BASIC26.04■■□□□ 1.76
DDX39AO00148 AC131274.2-201ENST00000580697 1507 ntBASIC26.04■■□□□ 1.76
DDX39AO00148 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC26.03■■□□□ 1.76
DDX39AO00148 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
DDX39AO00148 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC26.03■■□□□ 1.76
DDX39AO00148 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC26.03■■□□□ 1.76
DDX39AO00148 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
DDX39AO00148 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC26.03■■□□□ 1.76
DDX39AO00148 MIR6724-1-201ENST00000616420 92 ntBASIC26.03■■□□□ 1.76
DDX39AO00148 MIR6724-2-201ENST00000616483 92 ntBASIC26.03■■□□□ 1.76
DDX39AO00148 MIR6724-4-201ENST00000617390 92 ntBASIC26.03■■□□□ 1.76
DDX39AO00148 MIR6724-3-201ENST00000622482 92 ntBASIC26.03■■□□□ 1.76
DDX39AO00148 MED17-227ENST00000640521 2047 ntTSL 5 BASIC26.03■■□□□ 1.76
DDX39AO00148 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC26.03■■□□□ 1.76
DDX39AO00148 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC26.03■■□□□ 1.76
DDX39AO00148 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
DDX39AO00148 AC135731.1-201ENST00000569415 2548 ntBASIC26.03■■□□□ 1.76
DDX39AO00148 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
DDX39AO00148 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC26.02■■□□□ 1.76
DDX39AO00148 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
DDX39AO00148 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC26.02■■□□□ 1.76
DDX39AO00148 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC26.02■■□□□ 1.76
DDX39AO00148 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
DDX39AO00148 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
DDX39AO00148 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC26.02■■□□□ 1.76
DDX39AO00148 TRIR-202ENST00000588213 841 ntTSL 3 BASIC26.02■■□□□ 1.76
DDX39AO00148 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
DDX39AO00148 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
DDX39AO00148 CLTA-206ENST00000466396 695 ntTSL 2 BASIC26.01■■□□□ 1.75
DDX39AO00148 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC26.01■■□□□ 1.75
DDX39AO00148 LSM7-203ENST00000585409 512 ntTSL 2 BASIC26.01■■□□□ 1.75
DDX39AO00148 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
DDX39AO00148 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC26■■□□□ 1.75
DDX39AO00148 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC26■■□□□ 1.75
DDX39AO00148 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC26■■□□□ 1.75
DDX39AO00148 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
DDX39AO00148 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC26■■□□□ 1.75
DDX39AO00148 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC26■■□□□ 1.75
DDX39AO00148 AL117332.1-201ENST00000622628 974 ntBASIC26■■□□□ 1.75
DDX39AO00148 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC26■■□□□ 1.75
DDX39AO00148 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
DDX39AO00148 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC25.99■■□□□ 1.75
DDX39AO00148 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC25.99■■□□□ 1.75
DDX39AO00148 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC25.99■■□□□ 1.75
DDX39AO00148 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC25.99■■□□□ 1.75
DDX39AO00148 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
DDX39AO00148 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
DDX39AO00148 AC004448.1-201ENST00000458332 883 ntBASIC25.99■■□□□ 1.75
DDX39AO00148 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC25.99■■□□□ 1.75
DDX39AO00148 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC25.99■■□□□ 1.75
DDX39AO00148 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC25.99■■□□□ 1.75
DDX39AO00148 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC25.98■■□□□ 1.75
DDX39AO00148 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
DDX39AO00148 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
DDX39AO00148 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC25.98■■□□□ 1.75
DDX39AO00148 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC25.98■■□□□ 1.75
DDX39AO00148 SRR-208ENST00000576848 588 ntTSL 4 BASIC25.98■■□□□ 1.75
DDX39AO00148 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
DDX39AO00148 AC142381.3-201ENST00000568208 1670 ntBASIC25.98■■□□□ 1.75
DDX39AO00148 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC25.98■■□□□ 1.75
DDX39AO00148 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC25.98■■□□□ 1.75
DDX39AO00148 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC25.97■■□□□ 1.75
DDX39AO00148 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
DDX39AO00148 AK3-203ENST00000447596 705 ntTSL 2 BASIC25.97■■□□□ 1.75
DDX39AO00148 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
DDX39AO00148 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC25.97■■□□□ 1.75
DDX39AO00148 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
DDX39AO00148 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC25.96■■□□□ 1.75
Retrieved 100 of 98,524 protein–RNA pairs in 13.6 ms