Protein–RNA interactions for Protein: A6NJ46

NKX6-3, Homeobox protein Nkx-6.3, humanhuman

Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-3A6NJ46 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NKX6-3A6NJ46 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
NKX6-3A6NJ46 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC19.37■□□□□ 0.69
NKX6-3A6NJ46 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC19.37■□□□□ 0.69
NKX6-3A6NJ46 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC19.37■□□□□ 0.69
NKX6-3A6NJ46 BX664725.1-201ENST00000438252 379 ntBASIC19.37■□□□□ 0.69
NKX6-3A6NJ46 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC19.37■□□□□ 0.69
NKX6-3A6NJ46 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NKX6-3A6NJ46 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NKX6-3A6NJ46 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NKX6-3A6NJ46 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
NKX6-3A6NJ46 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC19.36■□□□□ 0.69
NKX6-3A6NJ46 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NKX6-3A6NJ46 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
NKX6-3A6NJ46 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NKX6-3A6NJ46 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC19.36■□□□□ 0.69
NKX6-3A6NJ46 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
NKX6-3A6NJ46 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC19.35■□□□□ 0.69
NKX6-3A6NJ46 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC19.35■□□□□ 0.69
NKX6-3A6NJ46 HLA-L-211ENST00000482052 1765 ntBASIC19.35■□□□□ 0.69
NKX6-3A6NJ46 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NKX6-3A6NJ46 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
NKX6-3A6NJ46 PRTG-204ENST00000561292 833 ntTSL 3 BASIC19.35■□□□□ 0.69
NKX6-3A6NJ46 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
NKX6-3A6NJ46 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC19.35■□□□□ 0.69
NKX6-3A6NJ46 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC19.35■□□□□ 0.69
NKX6-3A6NJ46 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
NKX6-3A6NJ46 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
NKX6-3A6NJ46 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC19.35■□□□□ 0.69
NKX6-3A6NJ46 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
NKX6-3A6NJ46 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NKX6-3A6NJ46 RNF146-205ENST00000477776 762 ntTSL 3 BASIC19.34■□□□□ 0.69
NKX6-3A6NJ46 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
NKX6-3A6NJ46 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NKX6-3A6NJ46 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
NKX6-3A6NJ46 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC19.34■□□□□ 0.69
NKX6-3A6NJ46 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NKX6-3A6NJ46 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NKX6-3A6NJ46 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC19.33■□□□□ 0.68
NKX6-3A6NJ46 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
NKX6-3A6NJ46 AL451085.2-201ENST00000605085 799 ntBASIC19.33■□□□□ 0.68
NKX6-3A6NJ46 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
NKX6-3A6NJ46 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
NKX6-3A6NJ46 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
NKX6-3A6NJ46 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
NKX6-3A6NJ46 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC19.33■□□□□ 0.68
NKX6-3A6NJ46 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC19.33■□□□□ 0.68
NKX6-3A6NJ46 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
NKX6-3A6NJ46 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NKX6-3A6NJ46 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NKX6-3A6NJ46 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
NKX6-3A6NJ46 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.68
NKX6-3A6NJ46 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NKX6-3A6NJ46 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC19.32■□□□□ 0.68
NKX6-3A6NJ46 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
NKX6-3A6NJ46 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC19.32■□□□□ 0.68
NKX6-3A6NJ46 STK32C-205ENST00000456004 607 ntTSL 2 BASIC19.32■□□□□ 0.68
NKX6-3A6NJ46 KRT125P-201ENST00000546827 989 ntBASIC19.32■□□□□ 0.68
NKX6-3A6NJ46 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NKX6-3A6NJ46 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC19.31■□□□□ 0.68
NKX6-3A6NJ46 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC19.31■□□□□ 0.68
NKX6-3A6NJ46 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
NKX6-3A6NJ46 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC19.31■□□□□ 0.68
NKX6-3A6NJ46 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC19.31■□□□□ 0.68
NKX6-3A6NJ46 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
NKX6-3A6NJ46 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
NKX6-3A6NJ46 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NKX6-3A6NJ46 AC009299.2-201ENST00000482477 511 ntBASIC19.31■□□□□ 0.68
NKX6-3A6NJ46 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NKX6-3A6NJ46 AC137630.3-201ENST00000607245 391 ntBASIC19.31■□□□□ 0.68
NKX6-3A6NJ46 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC19.31■□□□□ 0.68
NKX6-3A6NJ46 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
NKX6-3A6NJ46 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NKX6-3A6NJ46 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
NKX6-3A6NJ46 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC19.31■□□□□ 0.68
NKX6-3A6NJ46 AC141586.4-201ENST00000624558 1573 ntBASIC19.31■□□□□ 0.68
NKX6-3A6NJ46 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NKX6-3A6NJ46 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC19.3■□□□□ 0.68
NKX6-3A6NJ46 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NKX6-3A6NJ46 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC19.3■□□□□ 0.68
NKX6-3A6NJ46 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
NKX6-3A6NJ46 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC19.3■□□□□ 0.68
NKX6-3A6NJ46 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NKX6-3A6NJ46 AL139125.2-201ENST00000623134 1869 ntBASIC19.3■□□□□ 0.68
NKX6-3A6NJ46 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
NKX6-3A6NJ46 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NKX6-3A6NJ46 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NKX6-3A6NJ46 AL022069.1-201ENST00000568025 1636 ntBASIC19.29■□□□□ 0.68
NKX6-3A6NJ46 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NKX6-3A6NJ46 LTK-203ENST00000453182 2412 ntTSL 2 BASIC19.29■□□□□ 0.68
NKX6-3A6NJ46 AL161729.1-201ENST00000604104 1402 ntBASIC19.29■□□□□ 0.68
NKX6-3A6NJ46 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC19.29■□□□□ 0.68
NKX6-3A6NJ46 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC19.29■□□□□ 0.68
NKX6-3A6NJ46 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NKX6-3A6NJ46 Z92544.1-202ENST00000571933 1220 ntBASIC19.29■□□□□ 0.68
NKX6-3A6NJ46 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
NKX6-3A6NJ46 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
NKX6-3A6NJ46 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
NKX6-3A6NJ46 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NKX6-3A6NJ46 AF131216.4-201ENST00000638924 1588 ntBASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms