Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
BLOC1S4Q9NUP1 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
BLOC1S4Q9NUP1 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC25.98■■□□□ 1.75
BLOC1S4Q9NUP1 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC25.98■■□□□ 1.75
BLOC1S4Q9NUP1 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
BLOC1S4Q9NUP1 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC25.98■■□□□ 1.75
BLOC1S4Q9NUP1 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC25.98■■□□□ 1.75
BLOC1S4Q9NUP1 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC25.98■■□□□ 1.75
BLOC1S4Q9NUP1 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
BLOC1S4Q9NUP1 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
BLOC1S4Q9NUP1 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC25.97■■□□□ 1.75
BLOC1S4Q9NUP1 KRT18P24-201ENST00000344739 1156 ntBASIC25.97■■□□□ 1.75
BLOC1S4Q9NUP1 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
BLOC1S4Q9NUP1 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
BLOC1S4Q9NUP1 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
BLOC1S4Q9NUP1 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC25.96■■□□□ 1.75
BLOC1S4Q9NUP1 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC25.96■■□□□ 1.75
BLOC1S4Q9NUP1 GAK-223ENST00000628912 497 ntTSL 5 BASIC25.96■■□□□ 1.75
BLOC1S4Q9NUP1 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC25.96■■□□□ 1.75
BLOC1S4Q9NUP1 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC25.96■■□□□ 1.75
BLOC1S4Q9NUP1 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
BLOC1S4Q9NUP1 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC25.95■■□□□ 1.75
BLOC1S4Q9NUP1 AC103724.3-201ENST00000564481 992 ntBASIC25.95■■□□□ 1.74
BLOC1S4Q9NUP1 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
BLOC1S4Q9NUP1 AC141586.4-201ENST00000624558 1573 ntBASIC25.95■■□□□ 1.74
BLOC1S4Q9NUP1 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
BLOC1S4Q9NUP1 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
BLOC1S4Q9NUP1 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC25.94■■□□□ 1.74
BLOC1S4Q9NUP1 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC25.94■■□□□ 1.74
BLOC1S4Q9NUP1 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC25.94■■□□□ 1.74
BLOC1S4Q9NUP1 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
BLOC1S4Q9NUP1 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
BLOC1S4Q9NUP1 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC25.93■■□□□ 1.74
BLOC1S4Q9NUP1 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC25.93■■□□□ 1.74
BLOC1S4Q9NUP1 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC25.93■■□□□ 1.74
BLOC1S4Q9NUP1 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
BLOC1S4Q9NUP1 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
BLOC1S4Q9NUP1 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC25.93■■□□□ 1.74
BLOC1S4Q9NUP1 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC25.92■■□□□ 1.74
BLOC1S4Q9NUP1 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
BLOC1S4Q9NUP1 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC25.92■■□□□ 1.74
BLOC1S4Q9NUP1 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
BLOC1S4Q9NUP1 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
BLOC1S4Q9NUP1 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
BLOC1S4Q9NUP1 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC25.92■■□□□ 1.74
BLOC1S4Q9NUP1 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC25.91■■□□□ 1.74
BLOC1S4Q9NUP1 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC25.91■■□□□ 1.74
BLOC1S4Q9NUP1 AC004812.2-201ENST00000611079 2094 ntBASIC25.91■■□□□ 1.74
BLOC1S4Q9NUP1 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
BLOC1S4Q9NUP1 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
BLOC1S4Q9NUP1 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC25.91■■□□□ 1.74
BLOC1S4Q9NUP1 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
BLOC1S4Q9NUP1 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
BLOC1S4Q9NUP1 MIR4281-201ENST00000580852 62 ntBASIC25.91■■□□□ 1.74
BLOC1S4Q9NUP1 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC25.91■■□□□ 1.74
BLOC1S4Q9NUP1 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
BLOC1S4Q9NUP1 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
BLOC1S4Q9NUP1 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
BLOC1S4Q9NUP1 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC25.9■■□□□ 1.74
BLOC1S4Q9NUP1 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC25.9■■□□□ 1.74
BLOC1S4Q9NUP1 THA1P-201ENST00000590384 1145 ntBASIC25.9■■□□□ 1.74
BLOC1S4Q9NUP1 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC25.9■■□□□ 1.74
BLOC1S4Q9NUP1 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
BLOC1S4Q9NUP1 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC25.9■■□□□ 1.74
BLOC1S4Q9NUP1 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC25.89■■□□□ 1.74
BLOC1S4Q9NUP1 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC25.89■■□□□ 1.74
BLOC1S4Q9NUP1 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
BLOC1S4Q9NUP1 YBX1P4-201ENST00000392794 808 ntBASIC25.89■■□□□ 1.74
BLOC1S4Q9NUP1 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
BLOC1S4Q9NUP1 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
BLOC1S4Q9NUP1 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC25.89■■□□□ 1.73
BLOC1S4Q9NUP1 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC25.88■■□□□ 1.73
BLOC1S4Q9NUP1 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC25.88■■□□□ 1.73
BLOC1S4Q9NUP1 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC25.88■■□□□ 1.73
BLOC1S4Q9NUP1 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC25.88■■□□□ 1.73
BLOC1S4Q9NUP1 AF131216.4-201ENST00000638924 1588 ntBASIC25.88■■□□□ 1.73
BLOC1S4Q9NUP1 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
BLOC1S4Q9NUP1 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC25.88■■□□□ 1.73
BLOC1S4Q9NUP1 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC25.88■■□□□ 1.73
BLOC1S4Q9NUP1 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
BLOC1S4Q9NUP1 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
BLOC1S4Q9NUP1 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
BLOC1S4Q9NUP1 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
BLOC1S4Q9NUP1 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
BLOC1S4Q9NUP1 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC25.87■■□□□ 1.73
BLOC1S4Q9NUP1 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
BLOC1S4Q9NUP1 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC25.87■■□□□ 1.73
BLOC1S4Q9NUP1 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC25.86■■□□□ 1.73
BLOC1S4Q9NUP1 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
BLOC1S4Q9NUP1 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC25.86■■□□□ 1.73
BLOC1S4Q9NUP1 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC25.86■■□□□ 1.73
BLOC1S4Q9NUP1 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
BLOC1S4Q9NUP1 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
BLOC1S4Q9NUP1 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
BLOC1S4Q9NUP1 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
BLOC1S4Q9NUP1 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
BLOC1S4Q9NUP1 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
BLOC1S4Q9NUP1 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
BLOC1S4Q9NUP1 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
BLOC1S4Q9NUP1 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC25.84■■□□□ 1.73
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms