Protein–RNA interactions for Protein: Q96RR1

TWNK, Twinkle protein, mitochondrial, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TWNKQ96RR1 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
TWNKQ96RR1 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
TWNKQ96RR1 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC24.76■■□□□ 1.55
TWNKQ96RR1 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
TWNKQ96RR1 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
TWNKQ96RR1 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC24.75■■□□□ 1.55
TWNKQ96RR1 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
TWNKQ96RR1 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
TWNKQ96RR1 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
TWNKQ96RR1 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC24.74■■□□□ 1.55
TWNKQ96RR1 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC24.74■■□□□ 1.55
TWNKQ96RR1 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC24.74■■□□□ 1.55
TWNKQ96RR1 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC24.74■■□□□ 1.55
TWNKQ96RR1 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
TWNKQ96RR1 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
TWNKQ96RR1 AL139125.2-201ENST00000623134 1869 ntBASIC24.74■■□□□ 1.55
TWNKQ96RR1 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC24.73■■□□□ 1.55
TWNKQ96RR1 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC24.73■■□□□ 1.55
TWNKQ96RR1 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC24.73■■□□□ 1.55
TWNKQ96RR1 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
TWNKQ96RR1 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
TWNKQ96RR1 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC24.73■■□□□ 1.55
TWNKQ96RR1 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
TWNKQ96RR1 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
TWNKQ96RR1 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
TWNKQ96RR1 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC24.72■■□□□ 1.55
TWNKQ96RR1 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
TWNKQ96RR1 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC24.72■■□□□ 1.55
TWNKQ96RR1 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC24.72■■□□□ 1.55
TWNKQ96RR1 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC24.72■■□□□ 1.55
TWNKQ96RR1 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
TWNKQ96RR1 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC24.72■■□□□ 1.55
TWNKQ96RR1 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC24.72■■□□□ 1.55
TWNKQ96RR1 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
TWNKQ96RR1 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC24.71■■□□□ 1.55
TWNKQ96RR1 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
TWNKQ96RR1 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
TWNKQ96RR1 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC24.71■■□□□ 1.55
TWNKQ96RR1 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC24.71■■□□□ 1.55
TWNKQ96RR1 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
TWNKQ96RR1 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC24.71■■□□□ 1.55
TWNKQ96RR1 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC24.71■■□□□ 1.55
TWNKQ96RR1 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
TWNKQ96RR1 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC24.7■■□□□ 1.55
TWNKQ96RR1 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
TWNKQ96RR1 SENP5-202ENST00000419026 973 ntTSL 3 BASIC24.7■■□□□ 1.54
TWNKQ96RR1 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC24.7■■□□□ 1.54
TWNKQ96RR1 AC239859.2-201ENST00000444165 318 ntBASIC24.7■■□□□ 1.54
TWNKQ96RR1 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC24.7■■□□□ 1.54
TWNKQ96RR1 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC24.7■■□□□ 1.54
TWNKQ96RR1 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
TWNKQ96RR1 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
TWNKQ96RR1 EED-207ENST00000528180 1745 ntTSL 5 BASIC24.69■■□□□ 1.54
TWNKQ96RR1 AC021242.3-201ENST00000607598 1377 ntBASIC24.69■■□□□ 1.54
TWNKQ96RR1 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC24.69■■□□□ 1.54
TWNKQ96RR1 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC24.69■■□□□ 1.54
TWNKQ96RR1 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
TWNKQ96RR1 BX664725.1-201ENST00000438252 379 ntBASIC24.69■■□□□ 1.54
TWNKQ96RR1 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC24.69■■□□□ 1.54
TWNKQ96RR1 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC24.69■■□□□ 1.54
TWNKQ96RR1 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
TWNKQ96RR1 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC24.68■■□□□ 1.54
TWNKQ96RR1 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC24.68■■□□□ 1.54
TWNKQ96RR1 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
TWNKQ96RR1 Z92544.1-202ENST00000571933 1220 ntBASIC24.68■■□□□ 1.54
TWNKQ96RR1 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
TWNKQ96RR1 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC24.68■■□□□ 1.54
TWNKQ96RR1 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
TWNKQ96RR1 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
TWNKQ96RR1 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC24.67■■□□□ 1.54
TWNKQ96RR1 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC24.67■■□□□ 1.54
TWNKQ96RR1 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC24.67■■□□□ 1.54
TWNKQ96RR1 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC24.67■■□□□ 1.54
TWNKQ96RR1 OR2A1-AS1-204ENST00000470435 602 ntBASIC24.67■■□□□ 1.54
TWNKQ96RR1 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC24.67■■□□□ 1.54
TWNKQ96RR1 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC24.67■■□□□ 1.54
TWNKQ96RR1 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC24.67■■□□□ 1.54
TWNKQ96RR1 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
TWNKQ96RR1 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
TWNKQ96RR1 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
TWNKQ96RR1 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC24.66■■□□□ 1.54
TWNKQ96RR1 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
TWNKQ96RR1 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC24.66■■□□□ 1.54
TWNKQ96RR1 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
TWNKQ96RR1 PREB-202ENST00000406567 1910 ntTSL 5 BASIC24.66■■□□□ 1.54
TWNKQ96RR1 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC24.66■■□□□ 1.54
TWNKQ96RR1 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
TWNKQ96RR1 AC131274.2-201ENST00000580697 1507 ntBASIC24.66■■□□□ 1.54
TWNKQ96RR1 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC24.65■■□□□ 1.54
TWNKQ96RR1 LBH-205ENST00000407930 756 ntTSL 2 BASIC24.65■■□□□ 1.54
TWNKQ96RR1 TRIR-205ENST00000592273 783 ntTSL 3 BASIC24.65■■□□□ 1.54
TWNKQ96RR1 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC24.65■■□□□ 1.54
TWNKQ96RR1 LINC01124-201ENST00000409786 2117 ntBASIC24.65■■□□□ 1.54
TWNKQ96RR1 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC24.65■■□□□ 1.54
TWNKQ96RR1 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.54
TWNKQ96RR1 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC24.64■■□□□ 1.53
TWNKQ96RR1 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.53
TWNKQ96RR1 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
TWNKQ96RR1 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
TWNKQ96RR1 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC24.63■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms