Protein–RNA interactions for Protein: Q8NC44

RETREG2, Reticulophagy regulator 2, humanhuman

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2Q8NC44 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC26.31■■□□□ 1.8
RETREG2Q8NC44 AC131281.2-201ENST00000520478 145 ntBASIC26.31■■□□□ 1.8
RETREG2Q8NC44 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
RETREG2Q8NC44 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
RETREG2Q8NC44 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC26.3■■□□□ 1.8
RETREG2Q8NC44 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
RETREG2Q8NC44 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
RETREG2Q8NC44 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC26.3■■□□□ 1.8
RETREG2Q8NC44 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
RETREG2Q8NC44 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
RETREG2Q8NC44 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
RETREG2Q8NC44 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
RETREG2Q8NC44 AL136116.3-201ENST00000402907 1138 ntBASIC26.29■■□□□ 1.8
RETREG2Q8NC44 AC096887.2-201ENST00000623443 1957 ntBASIC26.29■■□□□ 1.8
RETREG2Q8NC44 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
RETREG2Q8NC44 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
RETREG2Q8NC44 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC26.28■■□□□ 1.8
RETREG2Q8NC44 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
RETREG2Q8NC44 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC26.28■■□□□ 1.8
RETREG2Q8NC44 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC26.28■■□□□ 1.8
RETREG2Q8NC44 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
RETREG2Q8NC44 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC26.28■■□□□ 1.8
RETREG2Q8NC44 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
RETREG2Q8NC44 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
RETREG2Q8NC44 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
RETREG2Q8NC44 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
RETREG2Q8NC44 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC26.27■■□□□ 1.8
RETREG2Q8NC44 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC26.27■■□□□ 1.8
RETREG2Q8NC44 MTDHP2-201ENST00000601468 714 ntBASIC26.27■■□□□ 1.8
RETREG2Q8NC44 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC26.27■■□□□ 1.8
RETREG2Q8NC44 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
RETREG2Q8NC44 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
RETREG2Q8NC44 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC26.26■■□□□ 1.79
RETREG2Q8NC44 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC26.26■■□□□ 1.79
RETREG2Q8NC44 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
RETREG2Q8NC44 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC26.26■■□□□ 1.79
RETREG2Q8NC44 MIR6724-1-201ENST00000616420 92 ntBASIC26.26■■□□□ 1.79
RETREG2Q8NC44 MIR6724-2-201ENST00000616483 92 ntBASIC26.26■■□□□ 1.79
RETREG2Q8NC44 MIR6724-4-201ENST00000617390 92 ntBASIC26.26■■□□□ 1.79
RETREG2Q8NC44 MIR6724-3-201ENST00000622482 92 ntBASIC26.26■■□□□ 1.79
RETREG2Q8NC44 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC26.26■■□□□ 1.79
RETREG2Q8NC44 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
RETREG2Q8NC44 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
RETREG2Q8NC44 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
RETREG2Q8NC44 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC26.25■■□□□ 1.79
RETREG2Q8NC44 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC26.25■■□□□ 1.79
RETREG2Q8NC44 AL117332.1-201ENST00000622628 974 ntBASIC26.25■■□□□ 1.79
RETREG2Q8NC44 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC26.25■■□□□ 1.79
RETREG2Q8NC44 MED17-227ENST00000640521 2047 ntTSL 5 BASIC26.25■■□□□ 1.79
RETREG2Q8NC44 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC26.25■■□□□ 1.79
RETREG2Q8NC44 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
RETREG2Q8NC44 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC26.24■■□□□ 1.79
RETREG2Q8NC44 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC26.24■■□□□ 1.79
RETREG2Q8NC44 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC26.24■■□□□ 1.79
RETREG2Q8NC44 AL356740.2-201ENST00000601559 647 ntBASIC26.24■■□□□ 1.79
RETREG2Q8NC44 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC26.24■■□□□ 1.79
RETREG2Q8NC44 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC26.24■■□□□ 1.79
RETREG2Q8NC44 AC022211.4-201ENST00000625094 2161 ntBASIC26.24■■□□□ 1.79
RETREG2Q8NC44 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC26.23■■□□□ 1.79
RETREG2Q8NC44 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
RETREG2Q8NC44 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC26.23■■□□□ 1.79
RETREG2Q8NC44 MIR3621-201ENST00000580529 85 ntBASIC26.23■■□□□ 1.79
RETREG2Q8NC44 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
RETREG2Q8NC44 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC26.23■■□□□ 1.79
RETREG2Q8NC44 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC26.23■■□□□ 1.79
RETREG2Q8NC44 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
RETREG2Q8NC44 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
RETREG2Q8NC44 AC097639.1-201ENST00000565519 1891 ntBASIC26.22■■□□□ 1.79
RETREG2Q8NC44 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
RETREG2Q8NC44 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
RETREG2Q8NC44 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC26.22■■□□□ 1.79
RETREG2Q8NC44 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
RETREG2Q8NC44 AC011551.1-201ENST00000614101 683 ntBASIC26.22■■□□□ 1.79
RETREG2Q8NC44 GAK-223ENST00000628912 497 ntTSL 5 BASIC26.22■■□□□ 1.79
RETREG2Q8NC44 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC26.22■■□□□ 1.79
RETREG2Q8NC44 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
RETREG2Q8NC44 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
RETREG2Q8NC44 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
RETREG2Q8NC44 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
RETREG2Q8NC44 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
RETREG2Q8NC44 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC26.21■■□□□ 1.79
RETREG2Q8NC44 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
RETREG2Q8NC44 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC26.21■■□□□ 1.79
RETREG2Q8NC44 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC26.21■■□□□ 1.79
RETREG2Q8NC44 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
RETREG2Q8NC44 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
RETREG2Q8NC44 FOXO3B-201ENST00000395675 1928 ntBASIC26.2■■□□□ 1.79
RETREG2Q8NC44 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC26.2■■□□□ 1.78
RETREG2Q8NC44 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
RETREG2Q8NC44 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
RETREG2Q8NC44 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC26.2■■□□□ 1.78
RETREG2Q8NC44 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC26.19■■□□□ 1.78
RETREG2Q8NC44 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
RETREG2Q8NC44 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
RETREG2Q8NC44 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC26.19■■□□□ 1.78
RETREG2Q8NC44 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
RETREG2Q8NC44 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC26.19■■□□□ 1.78
RETREG2Q8NC44 SSSCA1-AS1-201ENST00000567594 614 ntBASIC26.19■■□□□ 1.78
RETREG2Q8NC44 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC26.19■■□□□ 1.78
RETREG2Q8NC44 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC26.19■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms