Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.02■□□□□ 0.8
RAI1Q7Z5J4 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
RAI1Q7Z5J4 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RAI1Q7Z5J4 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RAI1Q7Z5J4 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RAI1Q7Z5J4 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
RAI1Q7Z5J4 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.79
RAI1Q7Z5J4 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
RAI1Q7Z5J4 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
RAI1Q7Z5J4 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RAI1Q7Z5J4 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
RAI1Q7Z5J4 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RAI1Q7Z5J4 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.01■□□□□ 0.79
RAI1Q7Z5J4 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
RAI1Q7Z5J4 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC20.01■□□□□ 0.79
RAI1Q7Z5J4 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RAI1Q7Z5J4 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RAI1Q7Z5J4 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20■□□□□ 0.79
RAI1Q7Z5J4 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC20■□□□□ 0.79
RAI1Q7Z5J4 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20■□□□□ 0.79
RAI1Q7Z5J4 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC20■□□□□ 0.79
RAI1Q7Z5J4 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC20■□□□□ 0.79
RAI1Q7Z5J4 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RAI1Q7Z5J4 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
RAI1Q7Z5J4 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC20■□□□□ 0.79
RAI1Q7Z5J4 AC133561.4-201ENST00000566112 224 ntBASIC20■□□□□ 0.79
RAI1Q7Z5J4 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC20■□□□□ 0.79
RAI1Q7Z5J4 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC19.99■□□□□ 0.79
RAI1Q7Z5J4 LBH-205ENST00000407930 756 ntTSL 2 BASIC19.99■□□□□ 0.79
RAI1Q7Z5J4 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
RAI1Q7Z5J4 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RAI1Q7Z5J4 AC145676.1-201ENST00000514988 2004 ntBASIC19.99■□□□□ 0.79
RAI1Q7Z5J4 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC19.99■□□□□ 0.79
RAI1Q7Z5J4 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC19.99■□□□□ 0.79
RAI1Q7Z5J4 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
RAI1Q7Z5J4 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
RAI1Q7Z5J4 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC19.98■□□□□ 0.79
RAI1Q7Z5J4 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC19.98■□□□□ 0.79
RAI1Q7Z5J4 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC19.98■□□□□ 0.79
RAI1Q7Z5J4 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
RAI1Q7Z5J4 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
RAI1Q7Z5J4 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RAI1Q7Z5J4 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
RAI1Q7Z5J4 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RAI1Q7Z5J4 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC19.98■□□□□ 0.79
RAI1Q7Z5J4 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC19.98■□□□□ 0.79
RAI1Q7Z5J4 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
RAI1Q7Z5J4 AC097639.1-201ENST00000565519 1891 ntBASIC19.97■□□□□ 0.79
RAI1Q7Z5J4 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RAI1Q7Z5J4 AC106739.1-201ENST00000617035 715 ntBASIC19.97■□□□□ 0.79
RAI1Q7Z5J4 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RAI1Q7Z5J4 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RAI1Q7Z5J4 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RAI1Q7Z5J4 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
RAI1Q7Z5J4 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RAI1Q7Z5J4 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC19.96■□□□□ 0.79
RAI1Q7Z5J4 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC19.96■□□□□ 0.79
RAI1Q7Z5J4 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
RAI1Q7Z5J4 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
RAI1Q7Z5J4 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RAI1Q7Z5J4 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RAI1Q7Z5J4 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC19.96■□□□□ 0.79
RAI1Q7Z5J4 AC090877.2-201ENST00000558441 1738 ntBASIC19.95■□□□□ 0.78
RAI1Q7Z5J4 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RAI1Q7Z5J4 RARRES2P6-201ENST00000567333 442 ntBASIC19.95■□□□□ 0.78
RAI1Q7Z5J4 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RAI1Q7Z5J4 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RAI1Q7Z5J4 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RAI1Q7Z5J4 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RAI1Q7Z5J4 AL031432.3-201ENST00000607698 485 ntBASIC19.94■□□□□ 0.78
RAI1Q7Z5J4 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
RAI1Q7Z5J4 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC19.94■□□□□ 0.78
RAI1Q7Z5J4 ZNRF2P3-201ENST00000424200 374 ntBASIC19.94■□□□□ 0.78
RAI1Q7Z5J4 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RAI1Q7Z5J4 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RAI1Q7Z5J4 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC19.94■□□□□ 0.78
RAI1Q7Z5J4 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RAI1Q7Z5J4 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC19.93■□□□□ 0.78
RAI1Q7Z5J4 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RAI1Q7Z5J4 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
RAI1Q7Z5J4 MIR6722-201ENST00000617286 78 ntBASIC19.93■□□□□ 0.78
RAI1Q7Z5J4 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC19.92■□□□□ 0.78
RAI1Q7Z5J4 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RAI1Q7Z5J4 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RAI1Q7Z5J4 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RAI1Q7Z5J4 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RAI1Q7Z5J4 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
RAI1Q7Z5J4 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RAI1Q7Z5J4 AC005837.3-201ENST00000612163 286 ntBASIC19.91■□□□□ 0.78
RAI1Q7Z5J4 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RAI1Q7Z5J4 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RAI1Q7Z5J4 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC19.91■□□□□ 0.78
RAI1Q7Z5J4 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
RAI1Q7Z5J4 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RAI1Q7Z5J4 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RAI1Q7Z5J4 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RAI1Q7Z5J4 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC19.9■□□□□ 0.78
RAI1Q7Z5J4 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RAI1Q7Z5J4 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RAI1Q7Z5J4 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms