Protein–RNA interactions for Protein: Q5SQN1

SNAP47, Synaptosomal-associated protein 47, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47Q5SQN1 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
SNAP47Q5SQN1 MIR6724-1-201ENST00000616420 92 ntBASIC22.49■■□□□ 1.19
SNAP47Q5SQN1 MIR6724-2-201ENST00000616483 92 ntBASIC22.49■■□□□ 1.19
SNAP47Q5SQN1 MIR6724-4-201ENST00000617390 92 ntBASIC22.49■■□□□ 1.19
SNAP47Q5SQN1 MIR6724-3-201ENST00000622482 92 ntBASIC22.49■■□□□ 1.19
SNAP47Q5SQN1 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
SNAP47Q5SQN1 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
SNAP47Q5SQN1 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
SNAP47Q5SQN1 RPP21-222ENST00000433076 577 ntTSL 2 BASIC22.48■■□□□ 1.19
SNAP47Q5SQN1 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC22.48■■□□□ 1.19
SNAP47Q5SQN1 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC22.48■■□□□ 1.19
SNAP47Q5SQN1 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC22.48■■□□□ 1.19
SNAP47Q5SQN1 LSM7-203ENST00000585409 512 ntTSL 2 BASIC22.48■■□□□ 1.19
SNAP47Q5SQN1 AL117332.1-201ENST00000622628 974 ntBASIC22.48■■□□□ 1.19
SNAP47Q5SQN1 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC22.48■■□□□ 1.19
SNAP47Q5SQN1 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
SNAP47Q5SQN1 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC22.48■■□□□ 1.19
SNAP47Q5SQN1 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
SNAP47Q5SQN1 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
SNAP47Q5SQN1 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC22.47■■□□□ 1.19
SNAP47Q5SQN1 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC22.47■■□□□ 1.19
SNAP47Q5SQN1 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC22.47■■□□□ 1.19
SNAP47Q5SQN1 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
SNAP47Q5SQN1 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC22.47■■□□□ 1.19
SNAP47Q5SQN1 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
SNAP47Q5SQN1 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
SNAP47Q5SQN1 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC22.46■■□□□ 1.19
SNAP47Q5SQN1 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC22.46■■□□□ 1.19
SNAP47Q5SQN1 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC22.46■■□□□ 1.19
SNAP47Q5SQN1 AK3-203ENST00000447596 705 ntTSL 2 BASIC22.46■■□□□ 1.19
SNAP47Q5SQN1 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC22.46■■□□□ 1.19
SNAP47Q5SQN1 EXOG-217ENST00000630638 197 ntTSL 5 BASIC22.46■■□□□ 1.19
SNAP47Q5SQN1 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
SNAP47Q5SQN1 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
SNAP47Q5SQN1 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
SNAP47Q5SQN1 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
SNAP47Q5SQN1 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
SNAP47Q5SQN1 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC22.45■■□□□ 1.18
SNAP47Q5SQN1 AC131281.2-201ENST00000520478 145 ntBASIC22.45■■□□□ 1.18
SNAP47Q5SQN1 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC22.45■■□□□ 1.18
SNAP47Q5SQN1 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
SNAP47Q5SQN1 AL356740.2-201ENST00000601559 647 ntBASIC22.45■■□□□ 1.18
SNAP47Q5SQN1 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC22.45■■□□□ 1.18
SNAP47Q5SQN1 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC22.45■■□□□ 1.18
SNAP47Q5SQN1 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
SNAP47Q5SQN1 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
SNAP47Q5SQN1 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
SNAP47Q5SQN1 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC22.44■■□□□ 1.18
SNAP47Q5SQN1 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC22.44■■□□□ 1.18
SNAP47Q5SQN1 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC22.44■■□□□ 1.18
SNAP47Q5SQN1 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC22.44■■□□□ 1.18
SNAP47Q5SQN1 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC22.44■■□□□ 1.18
SNAP47Q5SQN1 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC22.44■■□□□ 1.18
SNAP47Q5SQN1 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC22.44■■□□□ 1.18
SNAP47Q5SQN1 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC22.44■■□□□ 1.18
SNAP47Q5SQN1 LTK-203ENST00000453182 2412 ntTSL 2 BASIC22.43■■□□□ 1.18
SNAP47Q5SQN1 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC22.43■■□□□ 1.18
SNAP47Q5SQN1 CD72-202ENST00000378430 585 ntTSL 3 BASIC22.43■■□□□ 1.18
SNAP47Q5SQN1 AL136116.3-201ENST00000402907 1138 ntBASIC22.43■■□□□ 1.18
SNAP47Q5SQN1 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC22.43■■□□□ 1.18
SNAP47Q5SQN1 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC22.43■■□□□ 1.18
SNAP47Q5SQN1 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC22.43■■□□□ 1.18
SNAP47Q5SQN1 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
SNAP47Q5SQN1 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
SNAP47Q5SQN1 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC22.43■■□□□ 1.18
SNAP47Q5SQN1 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC22.42■■□□□ 1.18
SNAP47Q5SQN1 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC22.42■■□□□ 1.18
SNAP47Q5SQN1 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
SNAP47Q5SQN1 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
SNAP47Q5SQN1 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC22.42■■□□□ 1.18
SNAP47Q5SQN1 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
SNAP47Q5SQN1 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
SNAP47Q5SQN1 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC22.42■■□□□ 1.18
SNAP47Q5SQN1 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC22.42■■□□□ 1.18
SNAP47Q5SQN1 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
SNAP47Q5SQN1 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC22.42■■□□□ 1.18
SNAP47Q5SQN1 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC22.42■■□□□ 1.18
SNAP47Q5SQN1 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC22.42■■□□□ 1.18
SNAP47Q5SQN1 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
SNAP47Q5SQN1 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
SNAP47Q5SQN1 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
SNAP47Q5SQN1 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC22.41■■□□□ 1.18
SNAP47Q5SQN1 MIR3621-201ENST00000580529 85 ntBASIC22.41■■□□□ 1.18
SNAP47Q5SQN1 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
SNAP47Q5SQN1 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
SNAP47Q5SQN1 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
SNAP47Q5SQN1 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
SNAP47Q5SQN1 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.18
SNAP47Q5SQN1 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
SNAP47Q5SQN1 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
SNAP47Q5SQN1 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
SNAP47Q5SQN1 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.17
SNAP47Q5SQN1 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC22.39■■□□□ 1.17
SNAP47Q5SQN1 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC22.39■■□□□ 1.17
SNAP47Q5SQN1 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.17
SNAP47Q5SQN1 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
SNAP47Q5SQN1 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC22.39■■□□□ 1.17
SNAP47Q5SQN1 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.17
SNAP47Q5SQN1 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
SNAP47Q5SQN1 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms