Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
CDH6P55285 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
CDH6P55285 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
CDH6P55285 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC24.14■■□□□ 1.45
CDH6P55285 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
CDH6P55285 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
CDH6P55285 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
CDH6P55285 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
CDH6P55285 AL033527.3-201ENST00000566366 1196 ntBASIC24.13■■□□□ 1.45
CDH6P55285 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC24.13■■□□□ 1.45
CDH6P55285 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
CDH6P55285 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
CDH6P55285 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
CDH6P55285 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
CDH6P55285 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC24.12■■□□□ 1.45
CDH6P55285 GUK1-208ENST00000366728 842 ntTSL 2 BASIC24.12■■□□□ 1.45
CDH6P55285 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
CDH6P55285 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC24.12■■□□□ 1.45
CDH6P55285 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
CDH6P55285 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC24.12■■□□□ 1.45
CDH6P55285 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
CDH6P55285 AC004812.2-201ENST00000611079 2094 ntBASIC24.11■■□□□ 1.45
CDH6P55285 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
CDH6P55285 AC074183.2-201ENST00000623112 922 ntBASIC24.11■■□□□ 1.45
CDH6P55285 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
CDH6P55285 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC24.11■■□□□ 1.45
CDH6P55285 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC24.11■■□□□ 1.45
CDH6P55285 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC24.11■■□□□ 1.45
CDH6P55285 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
CDH6P55285 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC24.1■■□□□ 1.45
CDH6P55285 AC010980.1-201ENST00000587192 1142 ntBASIC24.1■■□□□ 1.45
CDH6P55285 PVT1_1.1-201ENST00000615125 194 ntBASIC24.1■■□□□ 1.45
CDH6P55285 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC24.1■■□□□ 1.45
CDH6P55285 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC24.1■■□□□ 1.45
CDH6P55285 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
CDH6P55285 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC24.1■■□□□ 1.45
CDH6P55285 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC24.1■■□□□ 1.45
CDH6P55285 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
CDH6P55285 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
CDH6P55285 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
CDH6P55285 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
CDH6P55285 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
CDH6P55285 IDNK-201ENST00000376417 511 ntTSL 5 BASIC24.09■■□□□ 1.45
CDH6P55285 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
CDH6P55285 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
CDH6P55285 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC24.09■■□□□ 1.45
CDH6P55285 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC24.09■■□□□ 1.45
CDH6P55285 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
CDH6P55285 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
CDH6P55285 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC24.09■■□□□ 1.45
CDH6P55285 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
CDH6P55285 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC24.08■■□□□ 1.45
CDH6P55285 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC24.08■■□□□ 1.45
CDH6P55285 AC022616.5-201ENST00000518796 181 ntBASIC24.08■■□□□ 1.45
CDH6P55285 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
CDH6P55285 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC24.08■■□□□ 1.44
CDH6P55285 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
CDH6P55285 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC24.07■■□□□ 1.44
CDH6P55285 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC24.07■■□□□ 1.44
CDH6P55285 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC24.07■■□□□ 1.44
CDH6P55285 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC24.07■■□□□ 1.44
CDH6P55285 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
CDH6P55285 BEX3-202ENST00000372634 753 ntTSL 2 BASIC24.07■■□□□ 1.44
CDH6P55285 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC24.07■■□□□ 1.44
CDH6P55285 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
CDH6P55285 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
CDH6P55285 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC24.06■■□□□ 1.44
CDH6P55285 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC24.06■■□□□ 1.44
CDH6P55285 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC24.06■■□□□ 1.44
CDH6P55285 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC24.06■■□□□ 1.44
CDH6P55285 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
CDH6P55285 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC24.06■■□□□ 1.44
CDH6P55285 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
CDH6P55285 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC24.06■■□□□ 1.44
CDH6P55285 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
CDH6P55285 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CDH6P55285 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC24.05■■□□□ 1.44
CDH6P55285 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC24.05■■□□□ 1.44
CDH6P55285 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC24.05■■□□□ 1.44
CDH6P55285 AC011551.1-201ENST00000614101 683 ntBASIC24.05■■□□□ 1.44
CDH6P55285 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
CDH6P55285 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CDH6P55285 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC24.04■■□□□ 1.44
CDH6P55285 SHD-204ENST00000599689 1729 ntTSL 5 BASIC24.04■■□□□ 1.44
CDH6P55285 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC24.04■■□□□ 1.44
CDH6P55285 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC24.04■■□□□ 1.44
CDH6P55285 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC24.04■■□□□ 1.44
CDH6P55285 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC24.04■■□□□ 1.44
CDH6P55285 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC24.04■■□□□ 1.44
CDH6P55285 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
CDH6P55285 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC24.04■■□□□ 1.44
CDH6P55285 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CDH6P55285 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC24.03■■□□□ 1.44
CDH6P55285 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC24.03■■□□□ 1.44
CDH6P55285 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC24.03■■□□□ 1.44
CDH6P55285 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CDH6P55285 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC24.02■■□□□ 1.44
CDH6P55285 ABCB10P4-201ENST00000566803 2184 ntBASIC24.02■■□□□ 1.44
CDH6P55285 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CDH6P55285 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC24.02■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 128.8 ms