Protein–RNA interactions for Protein: P31025

LCN1, Lipocalin-1, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1P31025 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
LCN1P31025 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
LCN1P31025 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
LCN1P31025 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
LCN1P31025 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
LCN1P31025 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC21.44■■□□□ 1.02
LCN1P31025 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC21.44■■□□□ 1.02
LCN1P31025 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC21.43■■□□□ 1.02
LCN1P31025 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
LCN1P31025 AL139125.2-201ENST00000623134 1869 ntBASIC21.43■■□□□ 1.02
LCN1P31025 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
LCN1P31025 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
LCN1P31025 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
LCN1P31025 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
LCN1P31025 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
LCN1P31025 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
LCN1P31025 YBX1P4-201ENST00000392794 808 ntBASIC21.42■■□□□ 1.02
LCN1P31025 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC21.42■■□□□ 1.02
LCN1P31025 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC21.42■■□□□ 1.02
LCN1P31025 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC21.42■■□□□ 1.02
LCN1P31025 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC21.42■■□□□ 1.02
LCN1P31025 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC21.42■■□□□ 1.02
LCN1P31025 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
LCN1P31025 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC21.42■■□□□ 1.02
LCN1P31025 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC21.42■■□□□ 1.02
LCN1P31025 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC21.42■■□□□ 1.02
LCN1P31025 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
LCN1P31025 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
LCN1P31025 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
LCN1P31025 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
LCN1P31025 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC21.41■■□□□ 1.02
LCN1P31025 AC120024.1-201ENST00000562672 995 ntBASIC21.41■■□□□ 1.02
LCN1P31025 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
LCN1P31025 GAK-223ENST00000628912 497 ntTSL 5 BASIC21.41■■□□□ 1.02
LCN1P31025 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
LCN1P31025 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
LCN1P31025 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
LCN1P31025 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
LCN1P31025 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
LCN1P31025 AL161729.1-201ENST00000604104 1402 ntBASIC21.4■■□□□ 1.02
LCN1P31025 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
LCN1P31025 THA1P-201ENST00000590384 1145 ntBASIC21.4■■□□□ 1.02
LCN1P31025 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
LCN1P31025 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC21.4■■□□□ 1.02
LCN1P31025 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
LCN1P31025 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
LCN1P31025 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC21.39■■□□□ 1.01
LCN1P31025 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
LCN1P31025 AC103834.1-201ENST00000520383 144 ntBASIC21.39■■□□□ 1.01
LCN1P31025 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC21.39■■□□□ 1.01
LCN1P31025 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
LCN1P31025 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
LCN1P31025 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
LCN1P31025 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
LCN1P31025 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
LCN1P31025 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
LCN1P31025 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC21.38■■□□□ 1.01
LCN1P31025 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
LCN1P31025 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC21.38■■□□□ 1.01
LCN1P31025 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC21.38■■□□□ 1.01
LCN1P31025 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
LCN1P31025 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.37■■□□□ 1.01
LCN1P31025 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC21.37■■□□□ 1.01
LCN1P31025 LINC00543-201ENST00000567234 1845 ntBASIC21.37■■□□□ 1.01
LCN1P31025 HLA-L-211ENST00000482052 1765 ntBASIC21.37■■□□□ 1.01
LCN1P31025 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
LCN1P31025 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
LCN1P31025 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
LCN1P31025 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
LCN1P31025 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
LCN1P31025 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC21.36■■□□□ 1.01
LCN1P31025 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
LCN1P31025 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
LCN1P31025 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
LCN1P31025 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
LCN1P31025 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC21.35■■□□□ 1.01
LCN1P31025 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
LCN1P31025 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC21.35■■□□□ 1.01
LCN1P31025 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC21.35■■□□□ 1.01
LCN1P31025 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
LCN1P31025 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
LCN1P31025 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
LCN1P31025 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
LCN1P31025 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC21.34■■□□□ 1.01
LCN1P31025 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
LCN1P31025 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
LCN1P31025 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC21.34■■□□□ 1.01
LCN1P31025 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
LCN1P31025 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC21.33■■□□□ 1.01
LCN1P31025 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
LCN1P31025 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
LCN1P31025 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
LCN1P31025 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC21.33■■□□□ 1.01
LCN1P31025 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC21.33■■□□□ 1.01
LCN1P31025 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC21.33■■□□□ 1.01
LCN1P31025 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
LCN1P31025 MIR4281-201ENST00000580852 62 ntBASIC21.33■■□□□ 1.01
LCN1P31025 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC21.33■■□□□ 1.01
LCN1P31025 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
LCN1P31025 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC21.33■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 257.6 ms