Protein–RNA interactions for Protein: P0CX72

TY1A-LR2, Transposon Ty1-LR2 Gag polyprotein, yeastyeast

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-LR2P0CX72 YGL214WYGL214W 486 nt6.12□□□□□ -1.43
TY1A-LR2P0CX72 NPA3YJR072C 1158 nt6.12□□□□□ -1.43
TY1A-LR2P0CX72 MMM1YLL006W 1281 nt6.12□□□□□ -1.43
TY1A-LR2P0CX72 ADD37YMR184W 597 nt6.12□□□□□ -1.43
TY1A-LR2P0CX72 MSG5YNL053W 1470 nt6.12□□□□□ -1.43
TY1A-LR2P0CX72 PDR16YNL231C 1056 nt6.12□□□□□ -1.43
TY1A-LR2P0CX72 MPA43YNL249C 1629 nt6.12□□□□□ -1.43
TY1A-LR2P0CX72 MKK1YOR231W 1527 nt6.12□□□□□ -1.43
TY1A-LR2P0CX72 CAR1YPL111W 1002 nt6.12□□□□□ -1.43
TY1A-LR2P0CX72 SNT309YPR101W 528 nt6.12□□□□□ -1.43
TY1A-LR2P0CX72 LDH1YBR204C 1128 nt6.12□□□□□ -1.43
TY1A-LR2P0CX72 NMD5YJR132W 3147 nt6.11□□□□□ -1.43
TY1A-LR2P0CX72 PHB2YGR231C 933 nt6.11□□□□□ -1.43
TY1A-LR2P0CX72 INP1YMR204C 1263 nt6.11□□□□□ -1.43
TY1A-LR2P0CX72 YNR040WYNR040W 771 nt6.11□□□□□ -1.43
TY1A-LR2P0CX72 ETT1YOR051C 1239 nt6.11□□□□□ -1.43
TY1A-LR2P0CX72 AMN1YBR158W 1650 nt6.1□□□□□ -1.43
TY1A-LR2P0CX72 CYC8YBR112C 2901 nt6.1□□□□□ -1.43
TY1A-LR2P0CX72 YHR069C-AYHR069C-A 363 nt6.1□□□□□ -1.43
TY1A-LR2P0CX72 ECM14YHR132C 1293 nt6.1□□□□□ -1.43
TY1A-LR2P0CX72 RFC2YJR068W 1062 nt6.1□□□□□ -1.43
TY1A-LR2P0CX72 YKR070WYKR070W 1059 nt6.1□□□□□ -1.43
TY1A-LR2P0CX72 YNL200CYNL200C 741 nt6.1□□□□□ -1.43
TY1A-LR2P0CX72 BXI1YNL305C 894 nt6.1□□□□□ -1.43
TY1A-LR2P0CX72 HUA2YOR284W 732 nt6.1□□□□□ -1.43
TY1A-LR2P0CX72 MUM2YBR057C 1101 nt6.1□□□□□ -1.43
TY1A-LR2P0CX72 YBR063CYBR063C 1215 nt6.1□□□□□ -1.43
TY1A-LR2P0CX72 HXT2YMR011W 1626 nt6.1□□□□□ -1.43
TY1A-LR2P0CX72 RAP1YNL216W 2484 nt6.09□□□□□ -1.43
TY1A-LR2P0CX72 DBP5YOR046C 1449 nt6.09□□□□□ -1.43
TY1A-LR2P0CX72 PHO3YBR092C 1404 nt6.09□□□□□ -1.43
TY1A-LR2P0CX72 CEM1YER061C 1329 nt6.09□□□□□ -1.43
TY1A-LR2P0CX72 YAP6YDR259C 1152 nt6.09□□□□□ -1.43
TY1A-LR2P0CX72 YFR032C-BYFR032C-B 264 nt6.09□□□□□ -1.43
TY1A-LR2P0CX72 VMA7YGR020C 357 nt6.09□□□□□ -1.43
TY1A-LR2P0CX72 RSM27YGR215W 333 nt6.09□□□□□ -1.43
TY1A-LR2P0CX72 CPR2YHR057C 618 nt6.09□□□□□ -1.43
TY1A-LR2P0CX72 PFS1YHR185C 714 nt6.09□□□□□ -1.43
TY1A-LR2P0CX72 YKR073CYKR073C 321 nt6.09□□□□□ -1.43
TY1A-LR2P0CX72 YLR374CYLR374C 390 nt6.09□□□□□ -1.43
TY1A-LR2P0CX72 MRPS17YMR188C 714 nt6.09□□□□□ -1.43
TY1A-LR2P0CX72 YNL162W-AYNL162W-A 219 nt6.09□□□□□ -1.43
TY1A-LR2P0CX72 TPT1YOL102C 693 nt6.09□□□□□ -1.43
TY1A-LR2P0CX72 YOR032W-AYOR032W-A 201 nt6.09□□□□□ -1.43
TY1A-LR2P0CX72 YCL001W-AYCL001W-A 462 nt6.09□□□□□ -1.43
TY1A-LR2P0CX72 SIR1YKR101W 1965 nt6.09□□□□□ -1.43
TY1A-LR2P0CX72 NOG2YNR053C 1461 nt6.09□□□□□ -1.44
TY1A-LR2P0CX72 TKL2YBR117C 2046 nt6.08□□□□□ -1.44
TY1A-LR2P0CX72 YDR261W-AYDR261W-A 1317 nt6.08□□□□□ -1.44
TY1A-LR2P0CX72 RNY1YPL123C 1305 nt6.08□□□□□ -1.44
TY1A-LR2P0CX72 RDR1YOR380W 1641 nt6.08□□□□□ -1.44
TY1A-LR2P0CX72 snR83snR83 306 nt6.08□□□□□ -1.44
TY1A-LR2P0CX72 DET1YDR051C 1005 nt6.08□□□□□ -1.44
TY1A-LR2P0CX72 YGR015CYGR015C 987 nt6.08□□□□□ -1.44
TY1A-LR2P0CX72 PRP38YGR075C 729 nt6.08□□□□□ -1.44
TY1A-LR2P0CX72 DOG2YHR043C 741 nt6.08□□□□□ -1.44
TY1A-LR2P0CX72 DOG1YHR044C 741 nt6.08□□□□□ -1.44
TY1A-LR2P0CX72 GRE3YHR104W 984 nt6.08□□□□□ -1.44
TY1A-LR2P0CX72 YKR045CYKR045C 552 nt6.08□□□□□ -1.44
TY1A-LR2P0CX72 TIS11YLR136C 858 nt6.08□□□□□ -1.44
TY1A-LR2P0CX72 GSF2YML048W 1212 nt6.08□□□□□ -1.44
TY1A-LR2P0CX72 PML39YML107C 1005 nt6.08□□□□□ -1.44
TY1A-LR2P0CX72 YNR014WYNR014W 639 nt6.08□□□□□ -1.44
TY1A-LR2P0CX72 RPL3YOR063W 1164 nt6.08□□□□□ -1.44
TY1A-LR2P0CX72 UFE1YOR075W 1041 nt6.08□□□□□ -1.44
TY1A-LR2P0CX72 SNF8YPL002C 702 nt6.08□□□□□ -1.44
TY1A-LR2P0CX72 YBR053CYBR053C 1077 nt6.08□□□□□ -1.44
TY1A-LR2P0CX72 CYS4YGR155W 1524 nt6.08□□□□□ -1.44
TY1A-LR2P0CX72 CEF1YMR213W 1773 nt6.08□□□□□ -1.44
TY1A-LR2P0CX72 SLI1YGR212W 1407 nt6.08□□□□□ -1.44
TY1A-LR2P0CX72 TIM50YPL063W 1431 nt6.08□□□□□ -1.44
TY1A-LR2P0CX72 SRP101YDR292C 1866 nt6.07□□□□□ -1.44
TY1A-LR2P0CX72 RPT3YDR394W 1287 nt6.07□□□□□ -1.44
TY1A-LR2P0CX72 HTD2YHR067W 843 nt6.07□□□□□ -1.44
TY1A-LR2P0CX72 CIA2YHR122W 696 nt6.07□□□□□ -1.44
TY1A-LR2P0CX72 TPK1YJL164C 1194 nt6.07□□□□□ -1.44
TY1A-LR2P0CX72 VPS24YKL041W 675 nt6.07□□□□□ -1.44
TY1A-LR2P0CX72 OPI8YKR035C 642 nt6.07□□□□□ -1.44
TY1A-LR2P0CX72 PRM9YAR031W 897 nt6.07□□□□□ -1.44
TY1A-LR2P0CX72 YLR312CYLR312C 1197 nt6.07□□□□□ -1.44
TY1A-LR2P0CX72 ADH3YMR083W 1128 nt6.07□□□□□ -1.44
TY1A-LR2P0CX72 HBN1YCL026C-B 582 nt6.07□□□□□ -1.44
TY1A-LR2P0CX72 ARG81YML099C 2643 nt6.07□□□□□ -1.44
TY1A-LR2P0CX72 PXL1YKR090W 2121 nt6.07□□□□□ -1.44
TY1A-LR2P0CX72 AVO1YOL078W 3531 nt6.07□□□□□ -1.44
TY1A-LR2P0CX72 ENO1YGR254W 1314 nt6.06□□□□□ -1.44
TY1A-LR2P0CX72 HMS1YOR032C 1305 nt6.06□□□□□ -1.44
TY1A-LR2P0CX72 RRP8YDR083W 1179 nt6.06□□□□□ -1.44
TY1A-LR2P0CX72 HEM2YGL040C 1029 nt6.06□□□□□ -1.44
TY1A-LR2P0CX72 COS8YHL048W 1146 nt6.06□□□□□ -1.44
TY1A-LR2P0CX72 YIL152WYIL152W 708 nt6.06□□□□□ -1.44
TY1A-LR2P0CX72 YJR071WYJR071W 369 nt6.06□□□□□ -1.44
TY1A-LR2P0CX72 YMR086C-AYMR086C-A 339 nt6.06□□□□□ -1.44
TY1A-LR2P0CX72 PHO85YPL031C 918 nt6.06□□□□□ -1.44
TY1A-LR2P0CX72 NUP49YGL172W 1419 nt6.06□□□□□ -1.44
TY1A-LR2P0CX72 SOL3YHR163W 750 nt6.05□□□□□ -1.44
TY1A-LR2P0CX72 AIM18YHR198C 966 nt6.05□□□□□ -1.44
TY1A-LR2P0CX72 YMR135W-AYMR135W-A 534 nt6.05□□□□□ -1.44
TY1A-LR2P0CX72 DOM34YNL001W 1161 nt6.05□□□□□ -1.44
TY1A-LR2P0CX72 SUN4YNL066W 1263 nt6.05□□□□□ -1.44
Retrieved 100 of 7,029 protein–RNA pairs in 26.8 ms