Protein–RNA interactions for Protein: P04234

CD3D, T-cell surface glycoprotein CD3 delta chain, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD3DP04234 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
CD3DP04234 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.67■□□□□ 0.74
CD3DP04234 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CD3DP04234 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CD3DP04234 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC19.67■□□□□ 0.74
CD3DP04234 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
CD3DP04234 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CD3DP04234 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
CD3DP04234 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CD3DP04234 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CD3DP04234 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CD3DP04234 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC19.66■□□□□ 0.74
CD3DP04234 LINC00565-201ENST00000562710 2331 ntBASIC19.66■□□□□ 0.74
CD3DP04234 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CD3DP04234 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CD3DP04234 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CD3DP04234 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CD3DP04234 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC19.66■□□□□ 0.74
CD3DP04234 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CD3DP04234 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
CD3DP04234 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CD3DP04234 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CD3DP04234 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
CD3DP04234 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CD3DP04234 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CD3DP04234 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CD3DP04234 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
CD3DP04234 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CD3DP04234 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CD3DP04234 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC19.64■□□□□ 0.73
CD3DP04234 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
CD3DP04234 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
CD3DP04234 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CD3DP04234 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
CD3DP04234 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CD3DP04234 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CD3DP04234 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
CD3DP04234 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CD3DP04234 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CD3DP04234 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
CD3DP04234 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CD3DP04234 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CD3DP04234 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CD3DP04234 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CD3DP04234 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CD3DP04234 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC19.63■□□□□ 0.73
CD3DP04234 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
CD3DP04234 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CD3DP04234 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CD3DP04234 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC19.62■□□□□ 0.73
CD3DP04234 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC19.62■□□□□ 0.73
CD3DP04234 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC19.62■□□□□ 0.73
CD3DP04234 AC126177.7-201ENST00000547904 679 ntBASIC19.62■□□□□ 0.73
CD3DP04234 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
CD3DP04234 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC19.62■□□□□ 0.73
CD3DP04234 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CD3DP04234 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
CD3DP04234 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CD3DP04234 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CD3DP04234 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CD3DP04234 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
CD3DP04234 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CD3DP04234 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CD3DP04234 HGH1-207ENST00000628266 258 ntTSL 5 BASIC19.61■□□□□ 0.73
CD3DP04234 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CD3DP04234 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CD3DP04234 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CD3DP04234 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CD3DP04234 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC19.6■□□□□ 0.73
CD3DP04234 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CD3DP04234 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CD3DP04234 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CD3DP04234 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CD3DP04234 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC19.59■□□□□ 0.73
CD3DP04234 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CD3DP04234 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
CD3DP04234 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
CD3DP04234 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CD3DP04234 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
CD3DP04234 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CD3DP04234 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CD3DP04234 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
CD3DP04234 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC19.58■□□□□ 0.73
CD3DP04234 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC19.58■□□□□ 0.73
CD3DP04234 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CD3DP04234 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC19.58■□□□□ 0.73
CD3DP04234 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CD3DP04234 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CD3DP04234 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CD3DP04234 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC19.58■□□□□ 0.72
CD3DP04234 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CD3DP04234 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC19.58■□□□□ 0.72
CD3DP04234 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
CD3DP04234 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CD3DP04234 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CD3DP04234 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CD3DP04234 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CD3DP04234 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CD3DP04234 HES6-205ENST00000409356 528 ntTSL 2 BASIC19.57■□□□□ 0.72
CD3DP04234 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 65.1 ms