Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.65■□□□□ 0.9
NPIPB4C9JG80 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NPIPB4C9JG80 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
NPIPB4C9JG80 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC20.64■□□□□ 0.89
NPIPB4C9JG80 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC20.64■□□□□ 0.89
NPIPB4C9JG80 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NPIPB4C9JG80 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NPIPB4C9JG80 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
NPIPB4C9JG80 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
NPIPB4C9JG80 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
NPIPB4C9JG80 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC20.63■□□□□ 0.89
NPIPB4C9JG80 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
NPIPB4C9JG80 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
NPIPB4C9JG80 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC20.63■□□□□ 0.89
NPIPB4C9JG80 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
NPIPB4C9JG80 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
NPIPB4C9JG80 AC012354.3-201ENST00000623734 483 ntBASIC20.63■□□□□ 0.89
NPIPB4C9JG80 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC20.63■□□□□ 0.89
NPIPB4C9JG80 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
NPIPB4C9JG80 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NPIPB4C9JG80 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
NPIPB4C9JG80 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NPIPB4C9JG80 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NPIPB4C9JG80 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NPIPB4C9JG80 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
NPIPB4C9JG80 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC20.62■□□□□ 0.89
NPIPB4C9JG80 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
NPIPB4C9JG80 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NPIPB4C9JG80 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
NPIPB4C9JG80 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NPIPB4C9JG80 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC20.61■□□□□ 0.89
NPIPB4C9JG80 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NPIPB4C9JG80 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NPIPB4C9JG80 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NPIPB4C9JG80 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
NPIPB4C9JG80 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC20.61■□□□□ 0.89
NPIPB4C9JG80 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC20.61■□□□□ 0.89
NPIPB4C9JG80 BHLHE23-202ENST00000612929 1109 ntBASIC20.61■□□□□ 0.89
NPIPB4C9JG80 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NPIPB4C9JG80 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NPIPB4C9JG80 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC20.61■□□□□ 0.89
NPIPB4C9JG80 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC20.61■□□□□ 0.89
NPIPB4C9JG80 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.61■□□□□ 0.89
NPIPB4C9JG80 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NPIPB4C9JG80 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC20.6■□□□□ 0.89
NPIPB4C9JG80 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
NPIPB4C9JG80 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NPIPB4C9JG80 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
NPIPB4C9JG80 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC20.6■□□□□ 0.89
NPIPB4C9JG80 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC20.6■□□□□ 0.89
NPIPB4C9JG80 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
NPIPB4C9JG80 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
NPIPB4C9JG80 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NPIPB4C9JG80 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
NPIPB4C9JG80 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
NPIPB4C9JG80 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
NPIPB4C9JG80 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
NPIPB4C9JG80 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC20.59■□□□□ 0.89
NPIPB4C9JG80 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC20.59■□□□□ 0.89
NPIPB4C9JG80 GAK-223ENST00000628912 497 ntTSL 5 BASIC20.59■□□□□ 0.89
NPIPB4C9JG80 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NPIPB4C9JG80 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NPIPB4C9JG80 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NPIPB4C9JG80 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC20.58■□□□□ 0.89
NPIPB4C9JG80 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
NPIPB4C9JG80 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
NPIPB4C9JG80 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
NPIPB4C9JG80 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NPIPB4C9JG80 KRT18P24-201ENST00000344739 1156 ntBASIC20.58■□□□□ 0.89
NPIPB4C9JG80 GUK1-208ENST00000366728 842 ntTSL 2 BASIC20.58■□□□□ 0.89
NPIPB4C9JG80 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC20.58■□□□□ 0.89
NPIPB4C9JG80 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
NPIPB4C9JG80 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC20.58■□□□□ 0.89
NPIPB4C9JG80 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC20.58■□□□□ 0.89
NPIPB4C9JG80 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC20.58■□□□□ 0.89
NPIPB4C9JG80 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
NPIPB4C9JG80 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
NPIPB4C9JG80 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
NPIPB4C9JG80 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.57■□□□□ 0.88
NPIPB4C9JG80 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NPIPB4C9JG80 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
NPIPB4C9JG80 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NPIPB4C9JG80 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
NPIPB4C9JG80 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NPIPB4C9JG80 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
NPIPB4C9JG80 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
NPIPB4C9JG80 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
NPIPB4C9JG80 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NPIPB4C9JG80 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NPIPB4C9JG80 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
NPIPB4C9JG80 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
NPIPB4C9JG80 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
NPIPB4C9JG80 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC20.56■□□□□ 0.88
NPIPB4C9JG80 AC120024.1-201ENST00000562672 995 ntBASIC20.56■□□□□ 0.88
NPIPB4C9JG80 PVT1_1.1-201ENST00000615125 194 ntBASIC20.56■□□□□ 0.88
NPIPB4C9JG80 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC20.56■□□□□ 0.88
NPIPB4C9JG80 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
NPIPB4C9JG80 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
NPIPB4C9JG80 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NPIPB4C9JG80 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms