Protein–RNA interactions for Protein: A0A087WUM0

SYNJ2BP-COX16, SYNJ2BP-COX16 readthrough (Fragment), humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNJ2BP-COX16A0A087WUM0 PRTG-204ENST00000561292 833 ntTSL 3 BASIC24.3■■□□□ 1.48
SYNJ2BP-COX16A0A087WUM0 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC24.3■■□□□ 1.48
SYNJ2BP-COX16A0A087WUM0 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
SYNJ2BP-COX16A0A087WUM0 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
SYNJ2BP-COX16A0A087WUM0 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC24.29■■□□□ 1.48
SYNJ2BP-COX16A0A087WUM0 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC24.29■■□□□ 1.48
SYNJ2BP-COX16A0A087WUM0 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
SYNJ2BP-COX16A0A087WUM0 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
SYNJ2BP-COX16A0A087WUM0 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
SYNJ2BP-COX16A0A087WUM0 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC24.29■■□□□ 1.48
SYNJ2BP-COX16A0A087WUM0 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC24.29■■□□□ 1.48
SYNJ2BP-COX16A0A087WUM0 AP003733.4-201ENST00000623785 1697 ntBASIC24.29■■□□□ 1.48
SYNJ2BP-COX16A0A087WUM0 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC24.29■■□□□ 1.48
SYNJ2BP-COX16A0A087WUM0 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC24.28■■□□□ 1.48
SYNJ2BP-COX16A0A087WUM0 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
SYNJ2BP-COX16A0A087WUM0 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC24.28■■□□□ 1.48
SYNJ2BP-COX16A0A087WUM0 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
SYNJ2BP-COX16A0A087WUM0 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC24.28■■□□□ 1.48
SYNJ2BP-COX16A0A087WUM0 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
SYNJ2BP-COX16A0A087WUM0 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
SYNJ2BP-COX16A0A087WUM0 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
SYNJ2BP-COX16A0A087WUM0 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
SYNJ2BP-COX16A0A087WUM0 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC24.27■■□□□ 1.48
SYNJ2BP-COX16A0A087WUM0 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
SYNJ2BP-COX16A0A087WUM0 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC24.27■■□□□ 1.48
SYNJ2BP-COX16A0A087WUM0 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC24.27■■□□□ 1.48
SYNJ2BP-COX16A0A087WUM0 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC24.27■■□□□ 1.48
SYNJ2BP-COX16A0A087WUM0 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC24.26■■□□□ 1.47
SYNJ2BP-COX16A0A087WUM0 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
SYNJ2BP-COX16A0A087WUM0 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC24.26■■□□□ 1.47
SYNJ2BP-COX16A0A087WUM0 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
SYNJ2BP-COX16A0A087WUM0 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
SYNJ2BP-COX16A0A087WUM0 AC009299.2-201ENST00000482477 511 ntBASIC24.26■■□□□ 1.47
SYNJ2BP-COX16A0A087WUM0 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
SYNJ2BP-COX16A0A087WUM0 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC24.26■■□□□ 1.47
SYNJ2BP-COX16A0A087WUM0 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
SYNJ2BP-COX16A0A087WUM0 HLA-L-211ENST00000482052 1765 ntBASIC24.26■■□□□ 1.47
SYNJ2BP-COX16A0A087WUM0 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC24.26■■□□□ 1.47
SYNJ2BP-COX16A0A087WUM0 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC24.25■■□□□ 1.47
SYNJ2BP-COX16A0A087WUM0 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
SYNJ2BP-COX16A0A087WUM0 RNF146-205ENST00000477776 762 ntTSL 3 BASIC24.25■■□□□ 1.47
SYNJ2BP-COX16A0A087WUM0 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC24.25■■□□□ 1.47
SYNJ2BP-COX16A0A087WUM0 TMEM202-AS1-202ENST00000565181 2325 ntBASIC24.25■■□□□ 1.47
SYNJ2BP-COX16A0A087WUM0 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
SYNJ2BP-COX16A0A087WUM0 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC24.25■■□□□ 1.47
SYNJ2BP-COX16A0A087WUM0 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
SYNJ2BP-COX16A0A087WUM0 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
SYNJ2BP-COX16A0A087WUM0 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
SYNJ2BP-COX16A0A087WUM0 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC24.24■■□□□ 1.47
SYNJ2BP-COX16A0A087WUM0 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC24.24■■□□□ 1.47
SYNJ2BP-COX16A0A087WUM0 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
SYNJ2BP-COX16A0A087WUM0 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC24.24■■□□□ 1.47
SYNJ2BP-COX16A0A087WUM0 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC24.24■■□□□ 1.47
SYNJ2BP-COX16A0A087WUM0 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC24.24■■□□□ 1.47
SYNJ2BP-COX16A0A087WUM0 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
SYNJ2BP-COX16A0A087WUM0 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC24.23■■□□□ 1.47
SYNJ2BP-COX16A0A087WUM0 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC24.23■■□□□ 1.47
SYNJ2BP-COX16A0A087WUM0 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC24.23■■□□□ 1.47
SYNJ2BP-COX16A0A087WUM0 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC24.23■■□□□ 1.47
SYNJ2BP-COX16A0A087WUM0 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
SYNJ2BP-COX16A0A087WUM0 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
SYNJ2BP-COX16A0A087WUM0 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC24.23■■□□□ 1.47
SYNJ2BP-COX16A0A087WUM0 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC24.22■■□□□ 1.47
SYNJ2BP-COX16A0A087WUM0 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC24.22■■□□□ 1.47
SYNJ2BP-COX16A0A087WUM0 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
SYNJ2BP-COX16A0A087WUM0 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC24.22■■□□□ 1.47
SYNJ2BP-COX16A0A087WUM0 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC24.22■■□□□ 1.47
SYNJ2BP-COX16A0A087WUM0 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC24.21■■□□□ 1.47
SYNJ2BP-COX16A0A087WUM0 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC24.21■■□□□ 1.47
SYNJ2BP-COX16A0A087WUM0 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC24.21■■□□□ 1.47
SYNJ2BP-COX16A0A087WUM0 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC24.21■■□□□ 1.47
SYNJ2BP-COX16A0A087WUM0 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
SYNJ2BP-COX16A0A087WUM0 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
SYNJ2BP-COX16A0A087WUM0 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC24.21■■□□□ 1.47
SYNJ2BP-COX16A0A087WUM0 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC24.21■■□□□ 1.47
SYNJ2BP-COX16A0A087WUM0 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
SYNJ2BP-COX16A0A087WUM0 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC24.2■■□□□ 1.46
SYNJ2BP-COX16A0A087WUM0 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC24.2■■□□□ 1.46
SYNJ2BP-COX16A0A087WUM0 AL035685.1-201ENST00000636663 812 ntBASIC24.2■■□□□ 1.46
SYNJ2BP-COX16A0A087WUM0 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC24.2■■□□□ 1.46
SYNJ2BP-COX16A0A087WUM0 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
SYNJ2BP-COX16A0A087WUM0 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
SYNJ2BP-COX16A0A087WUM0 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC24.19■■□□□ 1.46
SYNJ2BP-COX16A0A087WUM0 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
SYNJ2BP-COX16A0A087WUM0 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
SYNJ2BP-COX16A0A087WUM0 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
SYNJ2BP-COX16A0A087WUM0 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
SYNJ2BP-COX16A0A087WUM0 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
SYNJ2BP-COX16A0A087WUM0 AF131216.4-201ENST00000638924 1588 ntBASIC24.18■■□□□ 1.46
SYNJ2BP-COX16A0A087WUM0 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC24.18■■□□□ 1.46
SYNJ2BP-COX16A0A087WUM0 BX664725.1-201ENST00000438252 379 ntBASIC24.18■■□□□ 1.46
SYNJ2BP-COX16A0A087WUM0 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC24.18■■□□□ 1.46
SYNJ2BP-COX16A0A087WUM0 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
SYNJ2BP-COX16A0A087WUM0 LINC01124-201ENST00000409786 2117 ntBASIC24.17■■□□□ 1.46
SYNJ2BP-COX16A0A087WUM0 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC24.17■■□□□ 1.46
SYNJ2BP-COX16A0A087WUM0 AL139125.2-201ENST00000623134 1869 ntBASIC24.17■■□□□ 1.46
SYNJ2BP-COX16A0A087WUM0 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC24.17■■□□□ 1.46
SYNJ2BP-COX16A0A087WUM0 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
SYNJ2BP-COX16A0A087WUM0 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC24.17■■□□□ 1.46
SYNJ2BP-COX16A0A087WUM0 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms