Protein–RNA interactions for Protein: Q9HCP0

CSNK1G1, Casein kinase I isoform gamma-1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G1Q9HCP0 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
CSNK1G1Q9HCP0 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
CSNK1G1Q9HCP0 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC24.6■■□□□ 1.53
CSNK1G1Q9HCP0 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
CSNK1G1Q9HCP0 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
CSNK1G1Q9HCP0 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC24.6■■□□□ 1.53
CSNK1G1Q9HCP0 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC24.6■■□□□ 1.53
CSNK1G1Q9HCP0 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC24.6■■□□□ 1.53
CSNK1G1Q9HCP0 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC24.6■■□□□ 1.53
CSNK1G1Q9HCP0 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC24.6■■□□□ 1.53
CSNK1G1Q9HCP0 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
CSNK1G1Q9HCP0 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
CSNK1G1Q9HCP0 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC24.59■■□□□ 1.53
CSNK1G1Q9HCP0 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC24.59■■□□□ 1.53
CSNK1G1Q9HCP0 CREM-229ENST00000474362 1030 ntTSL 2 BASIC24.59■■□□□ 1.53
CSNK1G1Q9HCP0 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC24.59■■□□□ 1.53
CSNK1G1Q9HCP0 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC24.59■■□□□ 1.53
CSNK1G1Q9HCP0 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC24.59■■□□□ 1.53
CSNK1G1Q9HCP0 AC022211.4-201ENST00000625094 2161 ntBASIC24.59■■□□□ 1.53
CSNK1G1Q9HCP0 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
CSNK1G1Q9HCP0 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
CSNK1G1Q9HCP0 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
CSNK1G1Q9HCP0 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
CSNK1G1Q9HCP0 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
CSNK1G1Q9HCP0 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
CSNK1G1Q9HCP0 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC24.58■■□□□ 1.53
CSNK1G1Q9HCP0 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC24.58■■□□□ 1.53
CSNK1G1Q9HCP0 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC24.58■■□□□ 1.53
CSNK1G1Q9HCP0 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
CSNK1G1Q9HCP0 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC24.58■■□□□ 1.52
CSNK1G1Q9HCP0 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
CSNK1G1Q9HCP0 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC24.58■■□□□ 1.52
CSNK1G1Q9HCP0 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
CSNK1G1Q9HCP0 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
CSNK1G1Q9HCP0 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC24.57■■□□□ 1.52
CSNK1G1Q9HCP0 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
CSNK1G1Q9HCP0 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC24.57■■□□□ 1.52
CSNK1G1Q9HCP0 SENP5-202ENST00000419026 973 ntTSL 3 BASIC24.57■■□□□ 1.52
CSNK1G1Q9HCP0 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC24.57■■□□□ 1.52
CSNK1G1Q9HCP0 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC24.57■■□□□ 1.52
CSNK1G1Q9HCP0 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC24.57■■□□□ 1.52
CSNK1G1Q9HCP0 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC24.57■■□□□ 1.52
CSNK1G1Q9HCP0 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
CSNK1G1Q9HCP0 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
CSNK1G1Q9HCP0 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC24.56■■□□□ 1.52
CSNK1G1Q9HCP0 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC24.56■■□□□ 1.52
CSNK1G1Q9HCP0 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
CSNK1G1Q9HCP0 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
CSNK1G1Q9HCP0 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC24.56■■□□□ 1.52
CSNK1G1Q9HCP0 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
CSNK1G1Q9HCP0 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
CSNK1G1Q9HCP0 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
CSNK1G1Q9HCP0 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC24.55■■□□□ 1.52
CSNK1G1Q9HCP0 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
CSNK1G1Q9HCP0 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
CSNK1G1Q9HCP0 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC24.54■■□□□ 1.52
CSNK1G1Q9HCP0 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC24.54■■□□□ 1.52
CSNK1G1Q9HCP0 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
CSNK1G1Q9HCP0 TK2-202ENST00000417693 1046 ntTSL 2 BASIC24.54■■□□□ 1.52
CSNK1G1Q9HCP0 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
CSNK1G1Q9HCP0 AC092028.1-203ENST00000608262 953 ntBASIC24.54■■□□□ 1.52
CSNK1G1Q9HCP0 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
CSNK1G1Q9HCP0 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
CSNK1G1Q9HCP0 AC020928.2-201ENST00000588717 2197 ntBASIC24.54■■□□□ 1.52
CSNK1G1Q9HCP0 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
CSNK1G1Q9HCP0 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
CSNK1G1Q9HCP0 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
CSNK1G1Q9HCP0 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC24.53■■□□□ 1.52
CSNK1G1Q9HCP0 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC24.53■■□□□ 1.52
CSNK1G1Q9HCP0 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
CSNK1G1Q9HCP0 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC24.52■■□□□ 1.52
CSNK1G1Q9HCP0 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
CSNK1G1Q9HCP0 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
CSNK1G1Q9HCP0 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
CSNK1G1Q9HCP0 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
CSNK1G1Q9HCP0 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
CSNK1G1Q9HCP0 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
CSNK1G1Q9HCP0 LBH-205ENST00000407930 756 ntTSL 2 BASIC24.52■■□□□ 1.52
CSNK1G1Q9HCP0 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC24.52■■□□□ 1.52
CSNK1G1Q9HCP0 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC24.52■■□□□ 1.52
CSNK1G1Q9HCP0 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC24.52■■□□□ 1.52
CSNK1G1Q9HCP0 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
CSNK1G1Q9HCP0 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC24.51■■□□□ 1.51
CSNK1G1Q9HCP0 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
CSNK1G1Q9HCP0 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC24.51■■□□□ 1.51
CSNK1G1Q9HCP0 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC24.51■■□□□ 1.51
CSNK1G1Q9HCP0 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC24.51■■□□□ 1.51
CSNK1G1Q9HCP0 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
CSNK1G1Q9HCP0 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC24.5■■□□□ 1.51
CSNK1G1Q9HCP0 UNC93B8-201ENST00000511903 705 ntBASIC24.5■■□□□ 1.51
CSNK1G1Q9HCP0 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC24.49■■□□□ 1.51
CSNK1G1Q9HCP0 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC24.49■■□□□ 1.51
CSNK1G1Q9HCP0 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC24.49■■□□□ 1.51
CSNK1G1Q9HCP0 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC24.49■■□□□ 1.51
CSNK1G1Q9HCP0 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
CSNK1G1Q9HCP0 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC24.49■■□□□ 1.51
CSNK1G1Q9HCP0 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC24.49■■□□□ 1.51
CSNK1G1Q9HCP0 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC24.49■■□□□ 1.51
CSNK1G1Q9HCP0 AC142381.3-201ENST00000568208 1670 ntBASIC24.49■■□□□ 1.51
CSNK1G1Q9HCP0 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms