Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
TMEFF1Q8IYR6 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
TMEFF1Q8IYR6 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC23.36■■□□□ 1.33
TMEFF1Q8IYR6 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
TMEFF1Q8IYR6 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
TMEFF1Q8IYR6 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
TMEFF1Q8IYR6 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
TMEFF1Q8IYR6 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
TMEFF1Q8IYR6 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC23.35■■□□□ 1.33
TMEFF1Q8IYR6 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC23.35■■□□□ 1.33
TMEFF1Q8IYR6 MIR6722-201ENST00000617286 78 ntBASIC23.35■■□□□ 1.33
TMEFF1Q8IYR6 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC23.35■■□□□ 1.33
TMEFF1Q8IYR6 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC23.35■■□□□ 1.33
TMEFF1Q8IYR6 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC23.35■■□□□ 1.33
TMEFF1Q8IYR6 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC23.34■■□□□ 1.33
TMEFF1Q8IYR6 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
TMEFF1Q8IYR6 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC23.34■■□□□ 1.33
TMEFF1Q8IYR6 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC23.34■■□□□ 1.33
TMEFF1Q8IYR6 RARRES2P6-201ENST00000567333 442 ntBASIC23.34■■□□□ 1.33
TMEFF1Q8IYR6 AL136162.1-201ENST00000607711 1078 ntBASIC23.34■■□□□ 1.33
TMEFF1Q8IYR6 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
TMEFF1Q8IYR6 AC090877.2-201ENST00000558441 1738 ntBASIC23.33■■□□□ 1.33
TMEFF1Q8IYR6 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.33
TMEFF1Q8IYR6 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
TMEFF1Q8IYR6 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
TMEFF1Q8IYR6 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
TMEFF1Q8IYR6 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.33
TMEFF1Q8IYR6 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC23.33■■□□□ 1.33
TMEFF1Q8IYR6 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.32
TMEFF1Q8IYR6 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
TMEFF1Q8IYR6 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
TMEFF1Q8IYR6 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
TMEFF1Q8IYR6 AC092666.2-201ENST00000613287 246 ntBASIC23.32■■□□□ 1.32
TMEFF1Q8IYR6 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
TMEFF1Q8IYR6 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
TMEFF1Q8IYR6 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
TMEFF1Q8IYR6 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
TMEFF1Q8IYR6 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
TMEFF1Q8IYR6 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
TMEFF1Q8IYR6 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
TMEFF1Q8IYR6 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC23.31■■□□□ 1.32
TMEFF1Q8IYR6 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC23.31■■□□□ 1.32
TMEFF1Q8IYR6 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
TMEFF1Q8IYR6 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
TMEFF1Q8IYR6 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC23.3■■□□□ 1.32
TMEFF1Q8IYR6 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
TMEFF1Q8IYR6 PKM-203ENST00000389093 2279 ntTSL 5 BASIC23.3■■□□□ 1.32
TMEFF1Q8IYR6 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
TMEFF1Q8IYR6 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
TMEFF1Q8IYR6 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC23.3■■□□□ 1.32
TMEFF1Q8IYR6 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC23.3■■□□□ 1.32
TMEFF1Q8IYR6 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC23.3■■□□□ 1.32
TMEFF1Q8IYR6 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC23.3■■□□□ 1.32
TMEFF1Q8IYR6 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
TMEFF1Q8IYR6 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC23.3■■□□□ 1.32
TMEFF1Q8IYR6 AL121749.1-202ENST00000609313 2153 ntBASIC23.3■■□□□ 1.32
TMEFF1Q8IYR6 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
TMEFF1Q8IYR6 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
TMEFF1Q8IYR6 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
TMEFF1Q8IYR6 AL031432.3-201ENST00000607698 485 ntBASIC23.29■■□□□ 1.32
TMEFF1Q8IYR6 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC23.29■■□□□ 1.32
TMEFF1Q8IYR6 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC23.29■■□□□ 1.32
TMEFF1Q8IYR6 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
TMEFF1Q8IYR6 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC23.29■■□□□ 1.32
TMEFF1Q8IYR6 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
TMEFF1Q8IYR6 AC135279.3-201ENST00000610945 1311 ntBASIC23.29■■□□□ 1.32
TMEFF1Q8IYR6 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
TMEFF1Q8IYR6 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
TMEFF1Q8IYR6 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
TMEFF1Q8IYR6 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
TMEFF1Q8IYR6 SRD5A1P1-201ENST00000442297 786 ntBASIC23.28■■□□□ 1.32
TMEFF1Q8IYR6 SUDS3P1-201ENST00000505831 966 ntBASIC23.28■■□□□ 1.32
TMEFF1Q8IYR6 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
TMEFF1Q8IYR6 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
TMEFF1Q8IYR6 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
TMEFF1Q8IYR6 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC23.28■■□□□ 1.32
TMEFF1Q8IYR6 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
TMEFF1Q8IYR6 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC23.27■■□□□ 1.32
TMEFF1Q8IYR6 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
TMEFF1Q8IYR6 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
TMEFF1Q8IYR6 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC23.27■■□□□ 1.32
TMEFF1Q8IYR6 LGR4-203ENST00000480977 492 ntTSL 2 BASIC23.27■■□□□ 1.32
TMEFF1Q8IYR6 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
TMEFF1Q8IYR6 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC23.27■■□□□ 1.32
TMEFF1Q8IYR6 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC23.27■■□□□ 1.32
TMEFF1Q8IYR6 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
TMEFF1Q8IYR6 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC23.27■■□□□ 1.31
TMEFF1Q8IYR6 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
TMEFF1Q8IYR6 AC024257.2-201ENST00000549699 147 ntBASIC23.26■■□□□ 1.31
TMEFF1Q8IYR6 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC23.26■■□□□ 1.31
TMEFF1Q8IYR6 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
TMEFF1Q8IYR6 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
TMEFF1Q8IYR6 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
TMEFF1Q8IYR6 LBH-205ENST00000407930 756 ntTSL 2 BASIC23.25■■□□□ 1.31
TMEFF1Q8IYR6 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC23.25■■□□□ 1.31
TMEFF1Q8IYR6 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC23.25■■□□□ 1.31
TMEFF1Q8IYR6 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
TMEFF1Q8IYR6 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
TMEFF1Q8IYR6 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC23.24■■□□□ 1.31
TMEFF1Q8IYR6 HYI-206ENST00000372434 1025 ntTSL 5 BASIC23.24■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms