Protein–RNA interactions for Protein: Q6MZP7

LIN54, Protein lin-54 homolog, humanhuman

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54Q6MZP7 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC19.87■□□□□ 0.77
LIN54Q6MZP7 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LIN54Q6MZP7 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
LIN54Q6MZP7 MIR639-201ENST00000384974 98 ntBASIC19.87■□□□□ 0.77
LIN54Q6MZP7 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
LIN54Q6MZP7 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LIN54Q6MZP7 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
LIN54Q6MZP7 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LIN54Q6MZP7 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
LIN54Q6MZP7 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
LIN54Q6MZP7 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
LIN54Q6MZP7 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
LIN54Q6MZP7 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LIN54Q6MZP7 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LIN54Q6MZP7 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LIN54Q6MZP7 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
LIN54Q6MZP7 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
LIN54Q6MZP7 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
LIN54Q6MZP7 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LIN54Q6MZP7 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
LIN54Q6MZP7 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
LIN54Q6MZP7 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
LIN54Q6MZP7 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LIN54Q6MZP7 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LIN54Q6MZP7 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LIN54Q6MZP7 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
LIN54Q6MZP7 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
LIN54Q6MZP7 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC19.85■□□□□ 0.77
LIN54Q6MZP7 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC19.85■□□□□ 0.77
LIN54Q6MZP7 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
LIN54Q6MZP7 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LIN54Q6MZP7 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
LIN54Q6MZP7 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LIN54Q6MZP7 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
LIN54Q6MZP7 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LIN54Q6MZP7 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
LIN54Q6MZP7 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LIN54Q6MZP7 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
LIN54Q6MZP7 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC19.83■□□□□ 0.77
LIN54Q6MZP7 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
LIN54Q6MZP7 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
LIN54Q6MZP7 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
LIN54Q6MZP7 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
LIN54Q6MZP7 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
LIN54Q6MZP7 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
LIN54Q6MZP7 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC19.83■□□□□ 0.76
LIN54Q6MZP7 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
LIN54Q6MZP7 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
LIN54Q6MZP7 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
LIN54Q6MZP7 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
LIN54Q6MZP7 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
LIN54Q6MZP7 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
LIN54Q6MZP7 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC19.82■□□□□ 0.76
LIN54Q6MZP7 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
LIN54Q6MZP7 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LIN54Q6MZP7 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LIN54Q6MZP7 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
LIN54Q6MZP7 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LIN54Q6MZP7 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LIN54Q6MZP7 RPS2-202ENST00000526522 924 ntTSL 2 BASIC19.82■□□□□ 0.76
LIN54Q6MZP7 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
LIN54Q6MZP7 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC19.82■□□□□ 0.76
LIN54Q6MZP7 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC19.82■□□□□ 0.76
LIN54Q6MZP7 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LIN54Q6MZP7 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LIN54Q6MZP7 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
LIN54Q6MZP7 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LIN54Q6MZP7 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
LIN54Q6MZP7 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
LIN54Q6MZP7 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC19.81■□□□□ 0.76
LIN54Q6MZP7 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LIN54Q6MZP7 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
LIN54Q6MZP7 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC19.81■□□□□ 0.76
LIN54Q6MZP7 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC19.81■□□□□ 0.76
LIN54Q6MZP7 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LIN54Q6MZP7 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LIN54Q6MZP7 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC19.81■□□□□ 0.76
LIN54Q6MZP7 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC19.8■□□□□ 0.76
LIN54Q6MZP7 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LIN54Q6MZP7 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
LIN54Q6MZP7 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
LIN54Q6MZP7 ME2-208ENST00000638937 2471 ntTSL 5 BASIC19.8■□□□□ 0.76
LIN54Q6MZP7 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC19.8■□□□□ 0.76
LIN54Q6MZP7 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LIN54Q6MZP7 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LIN54Q6MZP7 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
LIN54Q6MZP7 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LIN54Q6MZP7 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
LIN54Q6MZP7 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
LIN54Q6MZP7 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
LIN54Q6MZP7 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LIN54Q6MZP7 MBP-237ENST00000579129 1052 ntTSL 5 BASIC19.8■□□□□ 0.76
LIN54Q6MZP7 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LIN54Q6MZP7 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LIN54Q6MZP7 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LIN54Q6MZP7 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
LIN54Q6MZP7 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
LIN54Q6MZP7 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
LIN54Q6MZP7 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LIN54Q6MZP7 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms